Gene Information

Name : Lebu_1606 (Lebu_1606)
Accession : YP_003164469.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1696259 - 1696933 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: fnu:FN0585 two-component response regulator CzcR

DNA sequence : 
ATGAAAATTTTGTTGGCAGAAGATGAAATAGATTTGAATAATATTATTACAAAATATCTTAAAAAAAATGGATATAGTGT
GGATAGCGTGCTTGATGGAGAAGAAGCGCTTGACTATCTGGAATATGGCGAATATGATTTAGTAATTTTGGATATTATGA
TGCCGAAAGTAAATGGATTTGAAGTTATAAAAAAACTTAGGGATAAGGGAAATCATACTTCAGTTCTTATGCTTACGGCA
AGGGATAGTGCAGATGATAAGGTAAAAGGACTTGATTTGGGAGCTGATGACTATATTGTGAAACCATTTGACTTTAATGA
GCTTATGGCAAGAATTAGGGCAGTTGTGAGAAGAAAGTATGGTAATAGTTCAAATAAACTTATGATAGGAAATTTAGTTT
TAAATACTTCAGAAAAATCAGTAACAAGAGGGGGAAAACAGATAGAATTAACTGGAAAAGAATACGAAGTTCTGGAATAC
CTTATGCAAAGTAAAAATCGAATTTTAAGTAGAGATCAGATTAAGGAGCATGTCTGGGACTTTGATTACGAAGGAGATTC
CAACATAATTGACGTTTTGATAAAAAATATTAGAAAAAAAATAGATGTAGAAGGTGGAAAGCAGATAATTTACACAAAAA
GAGGACTTGGCTATGTTATAAAAGATGAAAATTAA

Protein sequence : 
MKILLAEDEIDLNNIITKYLKKNGYSVDSVLDGEEALDYLEYGEYDLVILDIMMPKVNGFEVIKKLRDKGNHTSVLMLTA
RDSADDKVKGLDLGADDYIVKPFDFNELMARIRAVVRRKYGNSSNKLMIGNLVLNTSEKSVTRGGKQIELTGKEYEVLEY
LMQSKNRILSRDQIKEHVWDFDYEGDSNIIDVLIKNIRKKIDVEGGKQIIYTKRGLGYVIKDEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0083 Protein 4e-48 45
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0197 Protein 9e-44 45
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0288 Protein 5e-38 43
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0308 Protein 4e-44 43
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 6e-33 42
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-36 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-44 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0347 Protein 2e-39 41
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator BAC0638 Protein 6e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lebu_1606 YP_003164469.1 winged helix family two component transcriptional regulator VFG0596 Protein 1e-39 41