|
Name : Lebu_0137 (Lebu_0137) Accession : YP_003163058.1 Strain : Leptotrichia buccalis DSM 1135 Genome accession: NC_013192 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1576 EC number : - Position : 139443 - 139913 bp Length : 471 bp Strand : - Note : PFAM: protein of unknown function DUF163; KEGG: fnu:FN0463 cytoplasmic protein DNA sequence : ATGATAAGAATTAGTGTAGTGTGTATTGGAAAAATAAAAGATAAATACATAAAAGAGGGAATAGCTGAGTTTTCAAAAAG GTTGTCAAAATACATAAAACTCGATATTACTGAACTAGCTGAAGAAGATGATAACAAGGGGATTGAAAATGCAGTAAATT CAGAAACTGAAAGAATAATAAATGCTATTTCAAAAAAAAATTATTCGTACAATATTTTGCTTGACTTAAACGGAAAAATG CTATCTTCTGAAGAAATGGCAGATAAAATAGAAAAAATTTCCATGACAAACAGCGAAATTAATTTCATAATAGGTGGTTC AAACGGTGTAAATGACAAATTGCGAAAAATTGTAGATTTTAGGCTATGCTTTTCACCAATGACATTTCCACATCAGCTTA TGCGATTAATTTTGACAGAGCAAATATACAGATGGATTTCAATTAATAATAATATAAAATATCATAAATAA Protein sequence : MIRISVVCIGKIKDKYIKEGIAEFSKRLSKYIKLDITELAEEDDNKGIENAVNSETERIINAISKKNYSYNILLDLNGKM LSSEEMADKIEKISMTNSEINFIIGGSNGVNDKLRKIVDFRLCFSPMTFPHQLMRLILTEQIYRWISINNNIKYHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACL99851.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 6e-19 | 43 |
| unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 3e-27 | 41 |
| orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 3e-27 | 41 |
| unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 3e-27 | 41 |
| unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 3e-27 | 41 |
| unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 3e-27 | 41 |
| SSP0026 | YP_300116.1 | rRNA large subunit methyltransferase | Not tested | SCC15305RM | Protein | 9e-27 | 41 |
| unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 3e-27 | 41 |
| SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 3e-27 | 41 |
| SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 4e-27 | 41 |
| unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 3e-27 | 41 |
| SE0023 | NP_763578.1 | rRNA large subunit methyltransferase | Not tested | SCCpbp4 | Protein | 2e-27 | 41 |
| unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 3e-27 | 41 |
| SERP2529 | YP_190070.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 2e-27 | 41 |
| unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 3e-27 | 41 |
