Gene Information

Name : Lebu_0137 (Lebu_0137)
Accession : YP_003163058.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 139443 - 139913 bp
Length : 471 bp
Strand : -
Note : PFAM: protein of unknown function DUF163; KEGG: fnu:FN0463 cytoplasmic protein

DNA sequence :
ATGATAAGAATTAGTGTAGTGTGTATTGGAAAAATAAAAGATAAATACATAAAAGAGGGAATAGCTGAGTTTTCAAAAAG
GTTGTCAAAATACATAAAACTCGATATTACTGAACTAGCTGAAGAAGATGATAACAAGGGGATTGAAAATGCAGTAAATT
CAGAAACTGAAAGAATAATAAATGCTATTTCAAAAAAAAATTATTCGTACAATATTTTGCTTGACTTAAACGGAAAAATG
CTATCTTCTGAAGAAATGGCAGATAAAATAGAAAAAATTTCCATGACAAACAGCGAAATTAATTTCATAATAGGTGGTTC
AAACGGTGTAAATGACAAATTGCGAAAAATTGTAGATTTTAGGCTATGCTTTTCACCAATGACATTTCCACATCAGCTTA
TGCGATTAATTTTGACAGAGCAAATATACAGATGGATTTCAATTAATAATAATATAAAATATCATAAATAA

Protein sequence :
MIRISVVCIGKIKDKYIKEGIAEFSKRLSKYIKLDITELAEEDDNKGIENAVNSETERIINAISKKNYSYNILLDLNGKM
LSSEEMADKIEKISMTNSEINFIIGGSNGVNDKLRKIVDFRLCFSPMTFPHQLMRLILTEQIYRWISINNNIKYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 6e-19 43
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-27 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-27 41
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-27 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-27 41
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-27 41
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-27 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-27 41
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-27 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-27 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-27 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-27 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-27 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-27 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-27 41
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 9e-27 41