Gene Information

Name : Lebu_1374 (Lebu_1374)
Accession : YP_003164250.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 1452762 - 1453457 bp
Length : 696 bp
Strand : -
Note : KEGG: fnu:FN1851 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
GTGAGAAATAATAATAGAAAAAATGACGAAATGAGAGAAGTAAAAGTAACTAAAAATTATATTATTCATCCTGAAGGTTC
AGTTCTGATTGAATTTGGAAATACAAAGGTTATCTGTAATGCAACTGTTGAAGAAAAAATACCGAGATGGCTGAGGGGAA
CCGGATCTGGATGGATAACAGCAGAATACAGTATGTTACCAAGAGCTACAAACACACGTGTTCAAAGAGAATCAACAAAA
GGAAAACTTTCTGGAAGAACAATGGAAATCCAAAGGCTAATTGGCAGAGCTTTAAGAGCGACAATAGATTTGGAAAAATT
GGGAGAAAGAACGATAATGATTGATTGTGACGTGATTCAGGCTGACGGCGGGACAAGAACTGCCTCAATAACAGGAGCAT
ATCTAGCTTTGGAACTAGCAATAGAAAAATTAATTGATGAGAGAAAGCTGAAAGAAATGCCAATTAAAGCTAAAGTTGCG
GCAATAAGTGTTGGAAAGGTGCGAAATGAACTGCTTCTTGATTTAGAATACGAAGAAGATTCAAGAGCAGATGTGGATAT
GAATATCGTAATGAATGATAAAGGTGAATTTATCGAGCTTCAAGGAACAGGGGAAGAAGCGACTTTTACACAAACAGAAC
TTTTAAAATTTATTGAATTATCAAAAAATGCCTTTGATAAATTGTTTAAGTTATAA

Protein sequence :
MRNNNRKNDEMREVKVTKNYIIHPEGSVLIEFGNTKVICNATVEEKIPRWLRGTGSGWITAEYSMLPRATNTRVQRESTK
GKLSGRTMEIQRLIGRALRATIDLEKLGERTIMIDCDVIQADGGTRTASITGAYLALELAIEKLIDERKLKEMPIKAKVA
AISVGKVRNELLLDLEYEEDSRADVDMNIVMNDKGEFIELQGTGEEATFTQTELLKFIELSKNAFDKLFKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-56 54