Gene Information

Name : Lebu_0134 (Lebu_0134)
Accession : YP_003163055.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 136798 - 138282 bp
Length : 1485 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: chy:CHY_2365 lysyl-tRNA synthetase

DNA sequence :
ATGAGTAATCAAAACCACAATGATAATGGTATTATAAAAGAAAAATTAAAAAAAGTAGAAGAACTAAAAGAAATAGGAGT
TGAACCATATGGACGAAAATATGCAAAATTAAATGAAATTGCTGAAATTAACCAATATGATGAAACTTGTGAAAAAATCT
TTAAAACAGCAGGAAGAATCGTTGCCTTCAGAAGAATGGGGAAAAATGGATTTGGACAAATTCAAGATCCAACTGGAAAA
ATCCAATACTATGTAAAAAAAGATGAAGTTGGAGAAGAGCAGTACAAAATTTATAAAAAAATGGGACTTGGAGATTTTAT
TGGGCTAGAAGGAAAACTTTTTAGAACTAATACTGGAGAATTAACTTTAAGAGTTGACTCTTTTGAAGTACTGTCTAAAA
ATGTGCGTCCACTTCCAGAAAAATTTCACGGACTGACTAACATCGAAACTCGTTACAGACAAAGATACGTAGATCTCGTA
ATGAACAGGGAAGTTATGGAAACTATGAAAAAAAGATTCCAAATTATAAGATTTTTTAGAAGCTATCTTGAAAAACATGG
ATTTACAGAAGTGGAAACTCCAATGATGCACCCAGTTGCTGGAGGAGCTACAGCAAGACCATTTGTAACACATCATAATG
CACTTGATATGGAACTATTTTTGAGAATAGCGCCTGAATTGTACTTAAAAAGACTGCTTGTAGGTGGATTTGAAAAAGTA
TTTGAAATAAACAGAAGTTTTAGAAATGAAGGAATTTCAATAAAACACAATCCAGAATTTACAATGATGGAACTATACCA
GGCTTATGCTGATTTTAATGATATGATGGATTTGACAGAAGATTTGATTTCAAGTTTGACGTTTGAACTACACGGAAAAT
ATGAAATTGAATATGAAGATAAGACTATTAACATGGCAAAACCTTGGCGACGTGTTACAATGAAAGATATTGTAAAAGAA
ACAACTGGATTTGATTTTGACACAATTAGCAGCGATGAAGATGCGATAAATAAAGCAAAAGAAATGAATATTCCACTAGA
AAAAGACAAAACTTATACAAAATATGGAATTTTAAACTTGATATTTGAGGAAAAAGTAGAGGAAACTTTATTAAATCCGA
CTTTTATTACTGAATATCCAAAAGAAATTTCTCCACTTTCAAAAAACCAAAAAGGTGAAACTGAATGGGTAGACAGATTT
GAGTTATTCATTTCAGGAAGAGAATTTGCCAATGCTTATTCAGAATTAAATGATCCAAGAGATCAAAAGGAAAGATTTGA
AGAACAGGTGAAATTAAGAGAAGCTGGAGATGATGAAGCTCAAGGAATGGATTTAGACTATATTCGTGCCTTAGAATACG
GAATGCCACCAGCAGGAGGGCTTGGAATAGGAATTGACAGATTAGTTATGCTACAAACAAATTCTGCTTCAATTAGGGAT
GTTATTTTATTCCCAACATTAAGAAAAGAAGACATTGAATTATAA

Protein sequence :
MSNQNHNDNGIIKEKLKKVEELKEIGVEPYGRKYAKLNEIAEINQYDETCEKIFKTAGRIVAFRRMGKNGFGQIQDPTGK
IQYYVKKDEVGEEQYKIYKKMGLGDFIGLEGKLFRTNTGELTLRVDSFEVLSKNVRPLPEKFHGLTNIETRYRQRYVDLV
MNREVMETMKKRFQIIRFFRSYLEKHGFTEVETPMMHPVAGGATARPFVTHHNALDMELFLRIAPELYLKRLLVGGFEKV
FEINRSFRNEGISIKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINMAKPWRRVTMKDIVKE
TTGFDFDTISSDEDAINKAKEMNIPLEKDKTYTKYGILNLIFEEKVEETLLNPTFITEYPKEISPLSKNQKGETEWVDRF
ELFISGREFANAYSELNDPRDQKERFEEQVKLREAGDDEAQGMDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRD
VILFPTLRKEDIEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-108 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lebu_0134 YP_003163055.1 lysyl-tRNA synthetase VFG1668 Protein 1e-108 53