Gene Information

Name : CAP2UW1_4566 (CAP2UW1_4566)
Accession : YP_003162887.1
Strain :
Genome accession: NC_013190
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 38722 - 41127 bp
Length : 2406 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: sfr:Sfri_3462 heavy metal trans

DNA sequence :
ATGAGCGAATGCGCTTCCACGGCGTGTGGCTGCTCGGCTGGGCCGATCATCCAACCCACGACACAAGCCCCAGCGACAAC
CGGATCGGCTCAAGCGGTGTATCGCATCGAGAACATGGACTGCCCCACGGAAGAGGCGCTGATCCGAGGCAAGCTGGTCG
GGCTGGCGGGGGTGGTTGGTCTTGAGTTCAACCTGATGCAGCGTACTTTGGCCGTTCGGCACGAACTGCCTTCGTTGTTT
CCCGTTGAGCAGGCGCTAACCGCCATCGGCATGCAAGCCGTGCGCATGGATCAGGCATCGACCGGGCAAACGACCAAGCT
GTCCATTACCAAAATGGATTGCCCGACCGAAGAGACGTTGATCCGCAACAAGCTCGGTACCATGGCCGGAGTTGCCGATC
TCGATTTCAACCTGATGCAGCGCACGCTGTCGGTACGCCATGCGGACCAGGTTCTGCCGGACGTGCTCGCGGCACTGCAA
GCGCTTGGATTCGAGGCGCAGGTGTTGGACACCGCAGAGGCCGCATCGCCATCCGCATCCCTTGTGACCACGCCGACCAA
CTGGTGGCCGCTGGGCATCTCCTTTGTAACTGCATCGGCGGCCGAGGCGGTCTACTGGCTCCACAACGGCAATCATTGGT
CGGTCGTCGTTCTGGCGCTCGTCGCGGTCTTCACCGGCGGTCTGTCCACCTACAAGAAAGGTTGGATTGCGCTCAAGAAC
CGTAATCTCAACATGAACGCCCTGATGTCGATTGCCGTCACGGGTGCCATGTTGATCGGGCACTGGCCCGAGGCGGCAAT
GGTGATGGTGCTTTTCGCGCTGGCCGAGGTGATCGAAGCCAAGTCGCTGGATCGCGCCCGCAATGCCATCCGTGGCCTGC
TCGACCTGACCCCGGAACAGGCCACGGTGCAGCAGGCTGACGGCACATGGCGCGAGGTGGGTGCAAAGCAAATTGCCATC
GGTAGCCGCGTCCGGGTCAAGCCAGGTGAGCGCATCGCCCTGGATGGTGAGGTGCTGGAAGGCCGCTCTGCCGTCAACCA
AGCCCCGATCACGGGTGAAAGCCTTCCGGTCGAGAAATCCCCCGGTGATCCGGTGTTTGCGGGCACGATCAACGAATCCG
GTTCATTCGAGTACCGCGTCACCGCCGTGGCCAGCAACTCCACATTGGCCCGCATCATTCACGCGGTAGAGGCTGCCCAA
GGAAGCCGTGCGCCGACTCAGCGCTTTGTCGATCAGTTCGCCCGCTGGTACACGCCCATTGTTTTCGGTGTTGCCATCGC
CGTCGCGTTGTTGCCACCGCTGTTCATGGGTGCGGCATGGCTCGACTGGATTTACCGTGCATTGGTTCTGCTGGTGGTCG
CCTGCCCGTGCGCACTGGTGATCTCTACGCCGGTCAGCATCGTCAGCGGCCTGGCCGCTGCCGCCCGCCACGGCATTCTC
ATCAAGGGCGGCGTCTATCTGGAAGAAGGCCGCAAGCTGCGCTGGCTGGCTCTGGACAAGACCGGCACGATCACGCACGG
CAAGCCCGCACAGACCGATTTTGTCACTTGGGGCAATGCACTCGCCGCAAACAGCCGCAGCATCGCTGCCAGTCTGGCGG
CTCGTTCCGACCACCCTGTATCCAAAGCGGTGGCACAAGCCGCGCAGACGGATGGGGTTGCCTTACTCGACGTAGCCGAG
TTCAGCGCGCTGCCCGGTCGGGGCGTGCAAGGCCAAATCAACGGTGAGACCTACCATCTTGGCAACCAGCGGATGCTCGA
AGCGCTGGGGCAATGCACACCAGAACTGGAACAGCGCATCGCGGCGCTGGAAACCATGGGTAAAACTGTCGTGATGTTGG
TCAGCGCAAAAGGGGTTCATGCCTTATTTGCCGTAGCGGACACCATCAAGGAAAGCAGCAGGAGCGCCATTGCCGAGCTT
CATGCACTGGGCATCAACACCATGATGCTGACCGGCGACAACCCCCACACGGCACAGGCCATTGCCGCACAAGCCGGGAT
CGACAGTGCGCAAGGCAATCTGCTCCCAGACGACAAACTGCGCGAAGTTGAGCTACTGGCCATAAAGGGCAAGGTCGGCA
TGGTCGGTGATGGCATCAACGATGCCCCGGCCTTGGCGCGTGCGGACATCGGCTTTGCCATGGGAGCGGCTGGCACCGAT
ACCGCCATCGAGACCGCTGACGTGGCCCTGATGGACGACAACCTGGGCAAGATTCCGACCTTCGTGCGCCTGTCGCGTGC
GACGGCGCAGGTGCTGATGCAAAACATTGTGCTGGCCCTTGGCATCAAGGCAGTATTTCTGGTGCTGACCTTCACGGGTC
AAGCGACCATGTGGATGGCGGTGTTTGCTGATATGGGGGCCAGCTTGCTCGTCGTTGGCAATGGCTTGAGGCTGTTGCGC
AAATGA

Protein sequence :
MSECASTACGCSAGPIIQPTTQAPATTGSAQAVYRIENMDCPTEEALIRGKLVGLAGVVGLEFNLMQRTLAVRHELPSLF
PVEQALTAIGMQAVRMDQASTGQTTKLSITKMDCPTEETLIRNKLGTMAGVADLDFNLMQRTLSVRHADQVLPDVLAALQ
ALGFEAQVLDTAEAASPSASLVTTPTNWWPLGISFVTASAAEAVYWLHNGNHWSVVVLALVAVFTGGLSTYKKGWIALKN
RNLNMNALMSIAVTGAMLIGHWPEAAMVMVLFALAEVIEAKSLDRARNAIRGLLDLTPEQATVQQADGTWREVGAKQIAI
GSRVRVKPGERIALDGEVLEGRSAVNQAPITGESLPVEKSPGDPVFAGTINESGSFEYRVTAVASNSTLARIIHAVEAAQ
GSRAPTQRFVDQFARWYTPIVFGVAIAVALLPPLFMGAAWLDWIYRALVLLVVACPCALVISTPVSIVSGLAAAARHGIL
IKGGVYLEEGRKLRWLALDKTGTITHGKPAQTDFVTWGNALAANSRSIAASLAARSDHPVSKAVAQAAQTDGVALLDVAE
FSALPGRGVQGQINGETYHLGNQRMLEALGQCTPELEQRIAALETMGKTVVMLVSAKGVHALFAVADTIKESSRSAIAEL
HALGINTMMLTGDNPHTAQAIAAQAGIDSAQGNLLPDDKLREVELLAIKGKVGMVGDGINDAPALARADIGFAMGAAGTD
TAIETADVALMDDNLGKIPTFVRLSRATAQVLMQNIVLALGIKAVFLVLTFTGQATMWMAVFADMGASLLVVGNGLRLLR
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 69
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 1e-113 47
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 1e-113 47
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 2e-111 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_4566 YP_003162887.1 ATPase P BAC0298 Protein 0.0 76
CAP2UW1_4566 YP_003162887.1 ATPase P BAC0455 Protein 3e-88 42
CAP2UW1_4566 YP_003162887.1 ATPase P BAC0100 Protein 4e-61 42