Gene Information

Name : CAP2UW1_4565 (CAP2UW1_4565)
Accession : YP_003162886.1
Strain :
Genome accession: NC_013190
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 38198 - 38638 bp
Length : 441 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: shn:Shewana3_4323 MerR family transcriptional regulator

DNA sequence : 
ATGGAAATCAGAATTGGCGACCTCGCCAAGCGCTCTGGATGCGAGGTTGTGACCATCCGCTACTACGAGAAGGAAGGGCT
ACTGCCGAAGCCAGCGCGAAGCGGTGGCAACTTCCGGCTGTACGGTGAGGCGCACATTGAGCGCTTGCAATTCATCCGTC
ATTGCCGTTCGCTCGACATGACGTTGAGCGAGATTCGCGCATTGCTGGGTCTGCGAGACAACCCGATGCAGGACTGTGGG
GAGGTCAACACGCTGCTGGAGGCCCATATTCAACAGGTGGAAATGCGTGTGTCCGCGCTGTTGCAGTTAAAGCGGCACTT
GGTTGATTTGCGCGAGAAGTGTTCTGGCTCTCGATCTGTAGAGGCGTGCGGCATTTTGCAAGGGTTGGGCAATTGCAATT
GCCATGGTGAAAGTGCCACGAAAAGTCAAACATCTGGGTAA

Protein sequence : 
MEIRIGDLAKRSGCEVVTIRYYEKEGLLPKPARSGGNFRLYGEAHIERLQFIRHCRSLDMTLSEIRALLGLRDNPMQDCG
EVNTLLEAHIQQVEMRVSALLQLKRHLVDLREKCSGSRSVEACGILQGLGNCNCHGESATKSQTSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-35 57
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 7e-33 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 5e-33 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 5e-33 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-33 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-32 48
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-32 48
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-32 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_4565 YP_003162886.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 1e-33 59
CAP2UW1_4565 YP_003162886.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 3e-37 56