Gene Information

Name : Jden_0829 (Jden_0829)
Accession : YP_003160794.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 891294 - 892589 bp
Length : 1296 bp
Strand : +
Note : KEGG: acp:A2cp1_0651 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3; Glycosyl transferase, family 3-like

DNA sequence :
ATGACCACCCACCTCTTCGACACTGTTGATGTCATCCGGGCCAAGCGTGATGGACGTGAACTGACCAGCGAAGAAATCGC
CTGGGTCATCGATGCCTACACCCACGACCACGTGGCCGATTACCAAATGGCTGCCCTGAACATGGCCATCTTGCTCAACG
GCATGACCCGCCGGGAAATCGCTGACTGGACCCGGGCGATGATCGAATCAGGCGAACGCATGAACTTTGATCAGTTGTCC
CGCCCCACCGCGGACAAACACTCCACCGGCGGAGTGGGAGACAAAATTACTCTCCCATTGGCACCCCTCGTTGCCGTGTT
TGACGTGGCCGTCCCCCAACTGTCTGGGCGTGGACTGGGGCACACTGGTGGCACGCTCGACAAACTCGAAGCGATCGCCG
GGTGGCGCGCTGCACTCACCAACGACGAAATGATGCACCAACTGGACACGGTGGGGGCGGTGATCTGCCAAGCGGGTTCA
GGTCTTGCACCAGCGGACCGGAAGCTGTACGCACTGCGCGATGTCACGGGAACCGTTGAAGCGATCCCACTGATTGCATC
GTCAATCATGAGCAAAAAAATCGCAGAAGGAACGTCTGCGCTGGTTCTTGACGTCAAAGTCGGCTCCGGGGCATTTATGA
AAAATGTGGACCAAGCACGGGAACTCGCCCGGACAATGGTGGATCTGGGGACCGACGCTGGTGTAACAACAACTGCGCTA
CTCACCGACATGTCCACGCCGCTCGGACTCACCGTTGGAAATGCCCTTGAGGTGCGTGAATCCATTGAGGTGTTGGCCGG
AGGCGGCCCTGCAGATGTTGTTGATCTGACAGTTGCCCTCGCAGCAGAAATGCTCGCTGGAGCTGGGAAGACAACCGCAG
AAGACGACATCCGCGCAGCACTGAACGATGGTCGTGCGATGGATGCGTGGCGTGCCATGATCGCAGCGCAAGATGGTGAC
AATGATGCAGCATTGCCCGTGGCAGCAGAGCAGCATGTCATCACCGCTCCGCGCAGTGGGTACCTCACCACCCTTGACGC
ATACGCGGTCGGTGTCGCCTCGTGGCGGCTCGGTGCAGGCCGCGCCCGAAAAGACGATCAGGTTCAAGCCGGTGCCGGAA
TTGAACTGCATGCAAAGCCAGGGGACAAGGTAACGGCAGGAGCCCCACTGATGACTCTGCACACCGACACCCCAGAACGG
TTCGACCGTGCGATCGAGATCGCTGAGGAAGGTGTTGTGATCAGTGATGACGCACCAACCAACTCGCCATCGCTCATTAT
CGACCGGCTCGCATGA

Protein sequence :
MTTHLFDTVDVIRAKRDGRELTSEEIAWVIDAYTHDHVADYQMAALNMAILLNGMTRREIADWTRAMIESGERMNFDQLS
RPTADKHSTGGVGDKITLPLAPLVAVFDVAVPQLSGRGLGHTGGTLDKLEAIAGWRAALTNDEMMHQLDTVGAVICQAGS
GLAPADRKLYALRDVTGTVEAIPLIASSIMSKKIAEGTSALVLDVKVGSGAFMKNVDQARELARTMVDLGTDAGVTTTAL
LTDMSTPLGLTVGNALEVRESIEVLAGGGPADVVDLTVALAAEMLAGAGKTTAEDDIRAALNDGRAMDAWRAMIAAQDGD
NDAALPVAAEQHVITAPRSGYLTTLDAYAVGVASWRLGAGRARKDDQVQAGAGIELHAKPGDKVTAGAPLMTLHTDTPER
FDRAIEIAEEGVVISDDAPTNSPSLIIDRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 1e-126 64