Gene Information

Name : Jden_0407 (Jden_0407)
Accession : YP_003160377.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 431084 - 431791 bp
Length : 708 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esa:ESA_02459 macrolide transporter ATP- binding/permease protein

DNA sequence :
GTGAGTAGCACCGTCCTACACGCAACTGGCGTGAGTAAAAGCTTCCGTGATGGCAAAGAAACACGTCTCATTGTTCAGGG
CGCTGATCTTACGGTGAGCGCAGGCGACATGGTGGGGGTAGTAGGCCCCTCCGGTAGCGGTAAATCGACGCTGTTGTCGC
TGGTAGGAGGGTTACTCAGCCCTGATAGCGGGCAAGTCACTGTTGCCGGTGAGCTGTTGGACTACAGCAAACCCTCAACA
GTGGCCCGGCTCCGCAGGGAGTACCTTGGGTGGATTTCCCAGGAATACGGCCTTGTACCGAACGAGTCAGTGGCGCAGAG
CGTTTCCTTGCCGCTGATATTTGATAAACCCCGCCTCACACGGGCCGCACGAGGCACAGCAGTGAAAGAAGCGCTAAAGA
TCGCTGGGTTGGACATTCCCACATGGCGCCAAGTGGGGAAATTGTCTGGTGGTGAGCGTCAGCGAGTAGCGATTGCGCGG
GCGCTGGTGCGCACCCCGACCCTCCTGATCGCGGATGAACCAACAGCAGCTCTCGATGAAGCAACGGGGCGCACCATTGT
TGATAATGTCCGTGCAATTGCGGATTCAGGAACCGCTGTTCTCGTTGCCACCCACGACCCACAGGTTATCGCCGCCTGTG
ACCGCCTGTACCGGTTCCATGGCAACCAGCTCGTGGAAGCAACTCCGACCACACGCACCAACGCGTAA

Protein sequence :
MSSTVLHATGVSKSFRDGKETRLIVQGADLTVSAGDMVGVVGPSGSGKSTLLSLVGGLLSPDSGQVTVAGELLDYSKPST
VARLRREYLGWISQEYGLVPNESVAQSVSLPLIFDKPRLTRAARGTAVKEALKIAGLDIPTWRQVGKLSGGERQRVAIAR
ALVRTPTLLIADEPTAALDEATGRTIVDNVRAIADSGTAVLVATHDPQVIAACDRLYRFHGNQLVEATPTTRTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-17 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-17 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-17 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-17 42