Gene Information

Name : Jden_0034 (Jden_0034)
Accession : YP_003160016.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 40517 - 41839 bp
Length : 1323 bp
Strand : -
Note : KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase

DNA sequence :
GTGCGTGTATCGGTAATCGGCTGCGGATACTTGGGTGCGGTGCACGCGGCCGCAATGGCTGAGTTGGGTCACGATGTTGT
GGGAATTGATGTCGACTCAGAGAAGATCGCGATGCTCGAAAATGGCCAGCCACCATTTTTTGAGCCTGATCTGCCAGAGA
TTCTTTCCCGTGCACATGAAAGTGGGCGGTTGACCTTTAGCACAGATATCACCCTAGTTGCCGACTGCGACGTGCATTTC
ATTGGTGTGGGGACGCCACAGCTTCCGCACAGTGACGCCGCGGACATGCAGTATGTTGAGGCAGCGTTCGAAGGGCTTTC
TCAGCACATGCGTCCAGACGCTGTCATTGTCGGAAAGAGCACTGTTCCAGTTGGCACCGCTCAAGAACTGGCGAACAAGC
TTCAGGCCATCCACCCAAACGCTTCTCTCATCTGGAACCCTGAATTCCTCAGAGAAGGATTCGCTGTCAAAGACACCCTA
GAACCTGATCGTGTTGTCTATGGGTTAAGCGCCAAAGAGCTAGAGTCTGGTGATCGAGCGCGGTCACTACAGGTGCTCGA
TGACGTCTATAAACAGATTCTCGCGACAGGGACACCGCGACTTGTCACTGACTACGCGACTGCTGAGCTTGTGAAGGTTT
CAGCGAACGCTTTCCTCGCCACCAAGATTAGCTTTATCAATGCCATGGCTGAAATAGCTGAGGCGACTGGTGCTGATGTG
ACTCAGCTCGCGGACGCGATTGGTCTTGACGAGAGAATTGGGCGCCGCTTCCTCAATGCTGGCGTTGGTTTCGGTGGTGG
TTGCCTCCCTAAAGACATCAGGGCGCTTATAGCAAGAGCTGAGGAGCTGGGCGTCGGACGATCAGTGACCTTTCTCCGTG
AAGTGGACGACATCAATTCTCGGCGCAGAGAGCGGGTAGTTGAACTTGCAACTGAAGTGCTCGGAGGCTCTCTCAATGGA
AAGCGAGTGGCTGTTCTTGGGCTGACGTTCAAACCGAACTCGGATGATGTCCGTGATTCCCCCGCACTTGATGTCGCTGT
AAGGCTTAAAGGGTTAGGAGCAGACGTTGTTGCGACTGATCCACAAGGCATTCCGAACGCAGAGCAGCGGCATCCCCAAA
TCAACTACGAACTTTCTACGGAGAAGGCGCTCCAGAGCGCTGACCTCGTTTTACTTGTCACTGAATGGGATGAGTACAAA
CAACTCGACCCAACGTTTGTTGGATCACTTGTCCGCGAGAAGAATCTTATAGACGGTCGCAACGCGCTCGTCCCGGTCCA
ATGGTCCTTGGCAGAGTGGAACTATTTTGGTCTTGGTAGATAG

Protein sequence :
MRVSVIGCGYLGAVHAAAMAELGHDVVGIDVDSEKIAMLENGQPPFFEPDLPEILSRAHESGRLTFSTDITLVADCDVHF
IGVGTPQLPHSDAADMQYVEAAFEGLSQHMRPDAVIVGKSTVPVGTAQELANKLQAIHPNASLIWNPEFLREGFAVKDTL
EPDRVVYGLSAKELESGDRARSLQVLDDVYKQILATGTPRLVTDYATAELVKVSANAFLATKISFINAMAEIAEATGADV
TQLADAIGLDERIGRRFLNAGVGFGGGCLPKDIRALIARAEELGVGRSVTFLREVDDINSRRRERVVELATEVLGGSLNG
KRVAVLGLTFKPNSDDVRDSPALDVAVRLKGLGADVVATDPQGIPNAEQRHPQINYELSTEKALQSADLVLLVTEWDEYK
QLDPTFVGSLVREKNLIDGRNALVPVQWSLAEWNYFGLGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 49
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 49
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 49