Gene Information

Name : Jden_2512 (Jden_2512)
Accession : YP_003162447.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2698122 - 2699033 bp
Length : 912 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein

DNA sequence :
ATGATCACCGTTGAGAACGTCACCAAAACCTTTGGCGGGACTCGCGCACTGACCAACGTGTCGCTGACCGCGAAACCCGG
CCGCATCACCGGGTTCCTCGGCCCCAACGGGGCCGGAAAATCCACCGCAATGCGCATCATCTGCGGACTCGCACGCCCAG
ACAGCGGCACAGCACTCGTTGAAGGCGTCCCCTACGCCCACCTGCCCAACCCGGCACGACGGGTCGGGGCGCTCCTGGAC
GCTTCCGCCCACCACGACGGGCGCACCGGTCTGGAAACCCTCACCCTGGCCGCAATCGCCCTCGGGATCCCCCGCACCCG
CGTCACAGAGGTGATCGCGCTTGTCGGGCTCACCCCCAAAGAAGCGCGCCGCCGCGTCGGAACCTACTCCCTGGGTATGC
GTCAACGCCTCGGCATCGCCACCGCGCTCCTACCCGACCCGCGCATTCTCATCCTCGACGAACCCGTCAACGGCCTGGAC
CCCTCCGGAATCCGGTGGATGCGTGACCTGCTACGCCACTTCGCCGACGACGGAGGCACCGTCCTGCTGTCCTCCCACCT
CCTCATGGAAATTGAGGCAGTCGCAGACGACATCATTGTGATCGGGAACGGGCAGATCGTTGCGCAAGGCGCAAAAGAAG
ACCTCCTGCGCGGTTCCTCCACATCCGTGAGCGCACTGAGTATCGACCCGCTGCGCTCCGCGCTCCTCACCGCAGGACAC
ACCGCCGACACCGTCGGCCCCCACAGTGTGACCACCTCGGCTGACCCCGAAACCGTGGGACGGCTCGCACTTGACCACCA
GATTGTCCTCACCGGGCTGCACCAACAGTCCTCAGGCACCCTCGAAGACCTGTTCTTCTCCCTGACCTCCAACCACGACC
GCACCGTCACACCACAAGGGGCGCCCTCATGA

Protein sequence :
MITVENVTKTFGGTRALTNVSLTAKPGRITGFLGPNGAGKSTAMRIICGLARPDSGTALVEGVPYAHLPNPARRVGALLD
ASAHHDGRTGLETLTLAAIALGIPRTRVTEVIALVGLTPKEARRRVGTYSLGMRQRLGIATALLPDPRILILDEPVNGLD
PSGIRWMRDLLRHFADDGGTVLLSSHLLMEIEAVADDIIVIGNGQIVAQGAKEDLLRGSSTSVSALSIDPLRSALLTAGH
TADTVGPHSVTTSADPETVGRLALDHQIVLTGLHQQSSGTLEDLFFSLTSNHDRTVTPQGAPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 2e-43 49
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 2e-43 49
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 6e-45 46
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-46 45
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 6e-51 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 6e-25 41