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Name : Jden_2092 (Jden_2092) Accession : YP_003162032.1 Strain : Jonesia denitrificans DSM 20603 Genome accession: NC_013174 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2282502 - 2284049 bp Length : 1548 bp Strand : - Note : KEGG: kpn:KPN_03318 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : GTGACGTCACAGGAAAACACCCAAGCCCTCTCATCCGACACGGGGAACGACCTCCCTGAACAGCTAAAGGTTCGCCGGGA GAAACGTGCCCGTCTCCTTGACCAGGGGAAGGAAGCTTACCCAGTTACTGTGGACCGCACTCACACAATTGGGCAGATTC GTGCTGGGTACGCTCACCTGGAACTTGGTGAGGAAACTGAGGACGTCGTTGGTGTCGCTGGGCGAGTTGTCTTTTTGCGT AACACCGGCAAGCTGTGCTTTGTGGCGATCCAGGATGGTGACGGGCAGCGACTTCAGGTGATGTTGTCTCAAGGTGAAGT GGGTGCGCAGTCACTTGCAGACTTCAAGGCAACTGTTGATCTGGGTGATCACTTGTTCGCCAAGGGGCGTGTCATTTCTT CGCGTCGCGGCGAACTGTCCGTGTTTGCTTCACAGTGGTCGCTGGCGGCGAAGTCGTTGCGTCCATTGCCAAACTTGTAT GCCCGCGAAGATGGGACGACCGCGGAGTTGTCGGAAGAGGCGCGTGTCCGTCAGCGCTACGTTGATTTGATTGCTCGGCC CGCGGCCCGGGACGCGGCACGGTTGCGGTCACAAGTTGTACGGTCATTGCGAGATAACTTCCATGCGCGTGACTTTATGG AAATTGAAACCCCCATGCTGCAAACAATTCATGGTGGCGCTGCGGCTCGCCCGTTTGTGACGCATATGAATGCGTTTGAT ATGGACTTGTATCTGCGTATTGCGCCCGAACTATTCCTGAAGCGTGCTGTTGTTGGTGGGTTGGAACGTGTCTTTGAGAT CAACCGAAACTTCCGCAATGAAGGCGTAGACTCGTCACACTCACCAGAATTTGCGATGCTTGAGGCGTATGAAGCCTATG GCGATTACAACACAATGGCGGTGTTAACTCAGGATCTCGTGCAAACCGCTGCCCGTGATGCATTTGATGGGGAAACGCTA GTCACTCTTGCTGATGGTTCTGAATATGAATTGGGTGGTGAATGGGCTCAACTATCCATGTACCACTCTCTTTCGGAAGC CGCCGGGGTGGAGATCACTCCACAAACTTCGGTTGCTGAATTAATGACCCTGGCACAATCTGTAGAGATTTCATTGGATC CGAAGAAGGTGAGCCACGGAAAGCTTGTGGAAGAGCTGTGGGAACACTTTGTGGGTCATGACTTATGGGCGCCCACGTTT GTGCGTGATTTCCCCGTGGAGACGTCACCATTGACCAGGGATCACCGGTCAATTCCCGGTGTTGTGGAGAAGTGGGACTT GTATGTGCGTGGCTTTGAGCTCGCAACCGCATACTCGGAACTTGTTGATCCTGTGATTCAGCGCCAACGCTTTGAGGCAC AAGCAGTCCTTGCTGCCGCAGGCGACGATGAGGCAATGGTCCTTGATGAGGATTTCCTCACGGCAATGGAATATGCCATG CCGCCGAGCGGGGGTATGGGAATGGGGCTCGACCGACTGCTCATGGCTTTGACCGGGTTGGGTATTCGAGAGACTATTTT GTTCCCACTGGTCAAACCGGCACAGTAA Protein sequence : MTSQENTQALSSDTGNDLPEQLKVRREKRARLLDQGKEAYPVTVDRTHTIGQIRAGYAHLELGEETEDVVGVAGRVVFLR NTGKLCFVAIQDGDGQRLQVMLSQGEVGAQSLADFKATVDLGDHLFAKGRVISSRRGELSVFASQWSLAAKSLRPLPNLY AREDGTTAELSEEARVRQRYVDLIARPAARDAARLRSQVVRSLRDNFHARDFMEIETPMLQTIHGGAAARPFVTHMNAFD MDLYLRIAPELFLKRAVVGGLERVFEINRNFRNEGVDSSHSPEFAMLEAYEAYGDYNTMAVLTQDLVQTAARDAFDGETL VTLADGSEYELGGEWAQLSMYHSLSEAAGVEITPQTSVAELMTLAQSVEISLDPKKVSHGKLVEELWEHFVGHDLWAPTF VRDFPVETSPLTRDHRSIPGVVEKWDLYVRGFELATAYSELVDPVIQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAM PPSGGMGMGLDRLLMALTGLGIRETILFPLVKPAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-143 | 60 |
