Gene Information

Name : Jden_1929 (Jden_1929)
Accession : YP_003161874.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2114036 - 2114851 bp
Length : 816 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3617 ABC transporter-related protein

DNA sequence :
ATGACCAGTGATTCTGTCCCGATTGTGGCTGGTCTTGGTCATGATGTTCCGGTTCTTGAACTGCGCGGGGTTACTCGTTC
TTTCTCGAGCCGTACGCGAACAACAGTGGCGCTTGATCAGGTGAACCTTGCTGTGTATTCCGGTTCCTCGGTGGGCATTG
TGGGGGAATCAGGGGCGGGGAAATCCACAATCCTCAAGTTGCTCATGGGGTTAGATACCCCGACATCGGGTGAGGTTCGC
TTTCGGGGACAGGTGGTGAATCGGCGCGACCGCGCTCAGATGACAGAGTTCCGTCGTGCTGTGCAGATTGTGTTTCAGGA
CCCGCGCTCCTCACTTGACCCGCGCATGACGGTGGCACGCATCATTGCGGAACCTTTGAGGTCGCTGGGAATTCCGGGAA
ACCACCGTGATCGTGTCCGCGAGGTTCTCGCCCTGGTTGGGCTTGATGAGTCAGTTGAGAACAAGTATCCAGCTCAGTTT
TCTGGGGGGCAGCGCCAGCGTATTGCGATTGCGCGTGCACTTGCGCCGTCACCGTCTGTTCTTGTGGCCGATGAACCGGT
GAGCGCATTGGATGTGTCGGTGCGTTCACACATTGTTGATGTCCTTGCTGATCTCACTGACCGGTTGGGGGTGACGCTTG
TGATGGTGTCTCACGACATTGCGATAGTGGGGCAGTTGTGTGACCGGACGGTGGTTCTTCGGCATGGTCGAATTGAGGAG
GAAGGGGAGACGGCGCGGGTGCTCACGAAGCCGCAAGCACAGTACACGCGCACACTTCTCGATGCGGTGCCTCAGATGCC
GGGTGCCCTCGACTGA

Protein sequence :
MTSDSVPIVAGLGHDVPVLELRGVTRSFSSRTRTTVALDQVNLAVYSGSSVGIVGESGAGKSTILKLLMGLDTPTSGEVR
FRGQVVNRRDRAQMTEFRRAVQIVFQDPRSSLDPRMTVARIIAEPLRSLGIPGNHRDRVREVLALVGLDESVENKYPAQF
SGGQRQRIAIARALAPSPSVLVADEPVSALDVSVRSHIVDVLADLTDRLGVTLVMVSHDIAIVGQLCDRTVVLRHGRIEE
EGETARVLTKPQAQYTRTLLDAVPQMPGALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-14 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-14 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-14 41