Gene Information

Name : Jden_1804 (Jden_1804)
Accession : YP_003161750.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1970988 - 1971905 bp
Length : 918 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0445 ABC transporter ATP-binding protein

DNA sequence :
ATGGCCTCATCTTCTGACATTATCGTCTCGCACGTTACGAAGGAGTTCGGTCCGGTTCGCGCTGTTGACGATTTGTCGTT
TACGGTGCGTTCGGGGCGCGTCACTGGTTTCTTGGGTCCTAATGGGTCTGGGAAAACGACGACGCTGCGAATTCTGCTGG
GTTTGGTCCGCGCATCGTCAGGCGAAGCAACGTTCGCCGGTACTCGGTACGCGGATCTGACTCACCCCCTCACCCACGTG
GGAGCGTCGCTCGAGGCGACGAGTTTCCACCCAGGGCGTTCCGCGCTGAACCATTTGCGCTCGTATGCGCCTCTTGCCCA
GGCTGACGATGCGCGTTGCCGTGACTTGTTAGCACTGGTGGGGTTGGCACAGGTTGCCGATCAGCGCATCGGCGGTTTTT
CTTTGGGGATGCGCCAGCGTCTTGCTTTGGCTGCGTCCCTGCTGGGCGACCCCGATTATTTACTTCTCGATGAGCCCGCG
AACGGGTTGGATCCCGCTGGTATTCGGTGGTTGCGTGGGTTCTTGCGGTCACTTGCTCAGCAAGGCAAGACCGTGTTGGT
GTCGTCGCACATGCTGTCGGAGGTGCAGCACTCAGTCGATGATGTGGTCATCATCTCGCGCGGGCAACTGCGCCACCAGT
CGTCCATGGAGGGACTTGCCGCCCTGTCTGTCCCGCGTGTCCGGGTTGCCAGCCCTGATGTGGACAAACTAGCGGGGATC
GCCCAATCACAGGGGTGGACTATTGTGCAGTCGCACCCGGCCTCCTCGGAGCGTCCAGGCGTGTTGGACCTCGAAGGTGT
TGGGCTTGCTGCTGTGGGTGAAGCTGCTTTTGTCGCGGGTGTCATGGTGCAGGAACTCACTGACCTGACGGAATCACTAG
AAGATGTCTTTTTGCGTTTAACTGAGGGGATGAACTGA

Protein sequence :
MASSSDIIVSHVTKEFGPVRAVDDLSFTVRSGRVTGFLGPNGSGKTTTLRILLGLVRASSGEATFAGTRYADLTHPLTHV
GASLEATSFHPGRSALNHLRSYAPLAQADDARCRDLLALVGLAQVADQRIGGFSLGMRQRLALAASLLGDPDYLLLDEPA
NGLDPAGIRWLRGFLRSLAQQGKTVLVSSHMLSEVQHSVDDVVIISRGQLRHQSSMEGLAALSVPRVRVASPDVDKLAGI
AQSQGWTIVQSHPASSERPGVLDLEGVGLAAVGEAAFVAGVMVQELTDLTESLEDVFLRLTEGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 9e-44 45
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 9e-44 45
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 5e-47 45
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-33 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-33 43
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 3e-38 42