Gene Information

Name : Jden_1752 (Jden_1752)
Accession : YP_003161698.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 1904374 - 1906491 bp
Length : 2118 bp
Strand : -
Note : KEGG: atc:AGR_C_106 ribonucleoside-diphosphate reductase alpha chain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subun

DNA sequence :
ATGACTGACCAACTGGACTACCACGCGCTCAACGCGATGCTGAACCTCTACGGACCCAACGGAGAGATCCAGTTCGACAA
AGACCGTGAAGCGGCCCGGCAGTACTTCCTCCAACACGTCAACCAAAACACGGTGTTCTTCCACAGCCTCGAGGAAAAAC
TCGACTACCTCGTGGAGAACGACTACTACGAAGCCAGCGTCCTGAACACCTACAGCCGTGAGTTCATCACCCGGCTATTC
GACGCAGCCTACGCAATGAAATTCCGGTTTGAAACCTTCCTGGGCGCGTTCAAGTACTACACGTCCTACACCCTGAAAAC
ATTCGACGGAAAACGCTACCTCGAACGCTTCGAAGACCGCGTCTGCATGGTTGCGCTCACCCTCGCCGACGGCGACGAAA
CCCTCGCTCTTCAACTCGTTGACGAGATCATCTCCGGGCGTTTCCAACCCGCAACCCCCACCTTCTTAAACTCCGGGAAA
AAACAACGCGGCGAACCCGTGTCCTGCTTCCTGCTGCGCATCGAAGACAACATGGAGTCCATCGCCCGAGGCGTCAACTC
CGCGCTTCAACTGTCCAAACGCGGGGGAGGGGTTGCGCTGCTGCTGTCCAACCTCCGCGAATTTGGTGCCCCCATTAAGA
AGATCGAAAACCAGTCGTCCGGTGTCATCCCGGTCATGAAACTCCTGGAAGACTCCTTCTCTTACGCAAACCAACTCGGT
GCACGTCAAGGGGCCGGTGCTGTGTACCTGCACGCCCACCACCCCGACATCATGCGGTTCCTGGACACCAAACGCGAAAA
CGCCGACGAAAAAGTTCGCATCAAAACCCTGTCCATTGGTGTGGTCATCCCCGACATCACCTTTGAGCTCGCGAAAAAGA
ACGAGGACATGTACCTGTTCTCGCCTTACGATGTGGAACGCATTTACGGCAAACCGTTTGCTGATGTCAACGTCTCCGAG
CTGTACCACGAGATGGTCGACGACGGTCGCATCCGGAAAACCAAAATCAAAGCCCGCGACTTCTTCCAAACCATCGCGGA
ACTGCAGTTTGAATCTGGTTACCCGTACGTCATGTTCGAAGACACCGTGAACAAATCCAACCCCATCAAGGGCAAGATCA
CGCACTCGAACCTCTGCTCAGAAATCCTTCAGGTCTCCACCCCCTCGACCTACAACGATGACCTGTCGTACAAGGAAATC
GGGCGGGACATTTCCTGCAACCTCGGCTCACTGAACATTGCCAAAGCAATGGACGGGGGAAACCTGGGGGCCACGGTTGA
CACCGCAATCCGCGCACTGACCGCGGTATCGGATCAAACCTCCATCGACTCGGTGCCCTCCATCCGGCACGGCAACGAAC
TAGGCCACGCCATTGGTTTAGGGCAAATGAACCTCCATGGGTTCCTTGCCCGCGAACACATCCATTACGGGTCAGAAGAA
GGAATCGACTTCACCTCGATCTACTTCTACGCGGTGGCCTACCACGCCATCAAAGCCTCCAACCAACTCGCCATTGAGCG
GGGGCGCGCCTTTGGTGGCTTCGAAGACTCCACCTACGCGTCCGGTGAATACTTTGACAAGTACACCAACCGAGTGTGGG
AACCAACAACCCAACGTGTCAAAGACCTGTTCGAGAAGTTCGGGATCGCCATCCCCACCCAAGACGACTGGCGTGAACTG
AAAAAGTCCGTCATGGAACACGGGATTTACAACCAGAACCTCCAGGCGGTTCCCCCCACCGGGTCGATCTCCTACATCAA
CAACTCGACGTCCTCAATCCACCCGATTGTCTCCAAAATTGAGATCCGCAAGGAAGGCAAAATCGGGCGCGTGTACTACC
CAGCGCCGTACATGACCAACGAGAACCTCGAGTACTACCAAGACGCCTACGAAATCGGCTACGAAAAGATCGTCGACACG
TACGCGGCAGCCACCGAGCACGTTGACCAAGGCCTGTCTTTGACGTTGTTCTTCAAGGACACCGCGACCACCCGTGACGT
GAACCGTGCCCAAATTTACGCGTGGCGCAAGGGCATCAAAACTCTGTACTACATCCGACTCCGCCAACTCGCCCTCACCG
GAACAGAGGTCGAAGGCTGCGTCTCCTGCATGCTGTAA

Protein sequence :
MTDQLDYHALNAMLNLYGPNGEIQFDKDREAARQYFLQHVNQNTVFFHSLEEKLDYLVENDYYEASVLNTYSREFITRLF
DAAYAMKFRFETFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLADGDETLALQLVDEIISGRFQPATPTFLNSGK
KQRGEPVSCFLLRIEDNMESIARGVNSALQLSKRGGGVALLLSNLREFGAPIKKIENQSSGVIPVMKLLEDSFSYANQLG
ARQGAGAVYLHAHHPDIMRFLDTKRENADEKVRIKTLSIGVVIPDITFELAKKNEDMYLFSPYDVERIYGKPFADVNVSE
LYHEMVDDGRIRKTKIKARDFFQTIAELQFESGYPYVMFEDTVNKSNPIKGKITHSNLCSEILQVSTPSTYNDDLSYKEI
GRDISCNLGSLNIAKAMDGGNLGATVDTAIRALTAVSDQTSIDSVPSIRHGNELGHAIGLGQMNLHGFLAREHIHYGSEE
GIDFTSIYFYAVAYHAIKASNQLAIERGRAFGGFEDSTYASGEYFDKYTNRVWEPTTQRVKDLFEKFGIAIPTQDDWREL
KKSVMEHGIYNQNLQAVPPTGSISYINNSTSSIHPIVSKIEIRKEGKIGRVYYPAPYMTNENLEYYQDAYEIGYEKIVDT
YAAATEHVDQGLSLTLFFKDTATTRDVNRAQIYAWRKGIKTLYYIRLRQLALTGTEVEGCVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 78