Gene Information

Name : Jden_1745 (Jden_1745)
Accession : YP_003161693.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1894887 - 1895576 bp
Length : 690 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK2944 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAACGACCACACGACTCCGAGCTTAGAAATCACTGACGTCGTCTTGGAACTCGGTGATGGTGAATCTCGGGTCAGGGC
ACTCGATGAAGTATCCCTCACGGTGATGCCCGGAGAGTTCGCCGCCATCGTCGGGCCCTCCGGGTCGGGCAAGTCCTCGC
TGCTGGCGATCGCCGGGGCCATGGCGCGGCCTGACCGCGGCACGGTGCAAGTGCATGGCACCGACATCAGCAAACTCTCC
AAGAGCGCAACAACCCGTTTCCGCCTCCGCAATATCGGCTTCGTCTTCCAGTCCGGAAATCTCATCCCGTCCCTGACCGC
AGCAGACCAGTTGCGCCTCGCCGGTCGACTCGCCGGTGACCGGCATGTGGATGTCGAAACACTCCTCGGCTCTGTGGGGA
TGGCCCATCGCGCTAAGCATCGCCCGGGCCAACTGTCCGGCGGTGAGCGTCAGCGGGTCGGCATCGCCCGCGCACTCGTC
AACACACCCAGCCTGCTCCTCGTCGACGAGCCCACTGCCGCACTTGACCGCCGACGCGGCCACGAGGTCGTGGCATTACT
CGCCGACCGCGCGCACAACGCCAACGTCGCCGTGGTCATGGTCACACACGATCGCGAGGTACTAGAACATTGTGACCGTA
TCTTCGAGATGGTCGACGGGCGCTTGGGAGCTCACGCTCTCGTGAACTGA

Protein sequence : 
MNDHTTPSLEITDVVLELGDGESRVRALDEVSLTVMPGEFAAIVGPSGSGKSSLLAIAGAMARPDRGTVQVHGTDISKLS
KSATTRFRLRNIGFVFQSGNLIPSLTAADQLRLAGRLAGDRHVDVETLLGSVGMAHRAKHRPGQLSGGERQRVGIARALV
NTPSLLLVDEPTAALDRRRGHEVVALLADRAHNANVAVVMVTHDREVLEHCDRIFEMVDGRLGAHALVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jden_1745 YP_003161693.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 46
Jden_1745 YP_003161693.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 44