Gene Information

Name : Jden_1484 (Jden_1484)
Accession : YP_003161436.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1591377 - 1592801 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: afw:Anae109_4400 glutamine synthetase, type I

DNA sequence : 
ATGTTCACAACCCCCGAGGAAGCCATTGCTTTCCTGAAGGACGAGAACGTCGAGTTCGTCGACGCGCGCTTCTGCGACCT
GCCGGGACAGATGCAGCACTTTAACGTTCCGACCGACCAGTTCGACGAGGCCGCCTTCACTGACGGCATGATGTTTGATG
GTTCGTCGATCCGCGGTTTTCAAGCGATCCACGAATCCGATATGAAGCTCGTACCAGATGTCACTAGCGCCTACATTGAC
CCGTACCGTCAGCGCAAAACACTGGTTGTGAACTTCTCAATTGTTGACCCGTTCACTGGTGAGCCGTACTCCCGCGATCC
TCGCAATGTGGCACAGCGCGCGGAAGCGTACCTCAAGTCCACCGGTATTGCTGACACCGTGTTCTTCGGCCCAGAGGCCG
AGTTCTATGCCTTTGATGGCATCCGTTACCAAACCACTCCCGGTTCCACCCTGTACGAAATTGAGTCCAGCACTGCTGCC
TGGAACATGGGGCGCGAAGAAGAAGGCTTCAACAAGGGGTACAAAACTCGGACCAAAGGTGGGTACTTCCCTGTCTCCCC
CCTCGACCACTTCGCTGACTTCCGTGACGAGATCTGCGCTGATCTCGCATCGGTGGGGCTCGCTGTTGAGCGAGCACACC
ACGAGGTAGGTACTGCGGGCCAGCAGGAAATTAACTACCGCTTCAACACGCTGACTTCAGCAGGCGATGACCTCATGAAG
TTTAAGTACGTGGTGAAGAACGCCGCCTGGAAGATGGATAAAACTGTCACCTTCATGCCAAAGCCAATTTTTGGTGACAA
CGGTTCAGGTATGCACTGCCACCAGTCGCTGTGGAAAGACGGCAAGCCACTGTTCTTCGACGAGAAGGGCTACGGCGGTT
TGTCTGACCTGGCACGTTGGTACATTGGCGGTTTGTTGAAGCACGCACCAGCCGTACTTGCGTTCACGAACCCTTCGATC
AACTCCTACCGCCGGTTGGTTCCAGGCTATGAAGCACCGGTGAACCTGGTGTACTCGGCCCGTAACCGTTCAGCCGCGAT
CCGTATACCCATCACAGGGAGCAACGCGAAAGCAAAGCGTGTGGAGTTCCGCGTTCCTGACCCCACAGCGAACCCTTACC
TGGCGTTCTCTGCGCAGCTTCTTGCAGGTCTTGATGGGATCAAGAACCGTATCGAGCCACCAGAGCCAATCGACAAGGAC
CTGTACGAGCTTCCTCCAGAGGAGTACACCCAAATCGCTAAGGTGCCTGAATCTTTGGGTGAAGCCCTTGACGCGTTGGA
TGCTGACCACGACTTCCTCACTGTGGGTGATGTTTTCCCTGAAGACCTCATTCAAGCGTGGATTGCGTACAAGCGGGAAA
AGGAACTAGAGCCGATGAGCTTGCGTCCTCACCCTTACGAGTTTGAGCTGTACTACGACGTGTAA

Protein sequence : 
MFTTPEEAIAFLKDENVEFVDARFCDLPGQMQHFNVPTDQFDEAAFTDGMMFDGSSIRGFQAIHESDMKLVPDVTSAYID
PYRQRKTLVVNFSIVDPFTGEPYSRDPRNVAQRAEAYLKSTGIADTVFFGPEAEFYAFDGIRYQTTPGSTLYEIESSTAA
WNMGREEEGFNKGYKTRTKGGYFPVSPLDHFADFRDEICADLASVGLAVERAHHEVGTAGQQEINYRFNTLTSAGDDLMK
FKYVVKNAAWKMDKTVTFMPKPIFGDNGSGMHCHQSLWKDGKPLFFDEKGYGGLSDLARWYIGGLLKHAPAVLAFTNPSI
NSYRRLVPGYEAPVNLVYSARNRSAAIRIPITGSNAKAKRVEFRVPDPTANPYLAFSAQLLAGLDGIKNRIEPPEPIDKD
LYELPPEEYTQIAKVPESLGEALDALDADHDFLTVGDVFPEDLIQAWIAYKREKELEPMSLRPHPYEFELYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-84 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jden_1484 YP_003161436.1 glutamine synthetase, type I VFG1399 Protein 5e-152 63