Gene Information

Name : Jden_1264 (Jden_1264)
Accession : YP_003161223.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1354109 - 1356229 bp
Length : 2121 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: bha:BH2352 transketolase

DNA sequence :
GTGAACGCTTTCACCCCGACAGCTAATAAGCTTGAGTGGTCAGAACTCGATGACCGCGCAGTAACTTCAATCAAAGCTCT
CGCAGCAGACGCAGTTGAGAAAGTCGGCAACGGACACCCAGGAACAGCAATTTCCTTGGCCCCCGCCGCCTACCTGCTCT
TCCAGAAGGTTATGCGTCACAACCCAGCGGACCCCCAATGGGTGGGCCGCGACCGGTTCGTCTTGTCAGCAGGTCACTCC
TCACTGACAATCTACTTGCAGTTGTTCTTAGCCGGTTACGGTCTCGAAATGGACGACATCGCCTCACTTCGTACCTGGGG
TTCCAAGACACCAGGGCACCCCGAGTACGGACACACAGAGGGCGTTGAAATCACTACTGGTCCACTTGGGCAGGGTCTTG
CCTCCGCAGTAGGTATGGCATTCGCAGCGCGCCGTGAACGCGGTCTTTTTGACCCCGAAACTGCCGACGGTGAGTCAGCA
TTTGACCACAACGTTTATGTCATCGCTGGTGACGGGGACCTCCAAGAAGGAGTCACCTCTGAAGCGTCCTCGCTGGCTGG
GCACCAAGAACTCGGCAACCTTGTCGTGATCTACGACCAGAACCACATCTCCATTGAGGACGACACCGACGTTTCCTTCT
CAGAAGACGTCCTCGCTCGCTACGAATCCTACGGCTGGCACGTCCAACGTGTTGACTGGACTCACGGTGGAACCGAATAC
AGCGAAGACGTCGACGCGTTGTACTCAGCAATTCAAGAAGCGAACAAGGTCACCAACAAGCCATCGATCATCGCTCTTCG
CACCATCATTGGTTGGCCCTCCCCTACCAAACAGAACACCGGTGGGATTCACGGGTCTGCACTAGGCGGCAGTGAGGTCG
CTGGCTTAAAGGAAGCTCTCGGTCTTGACCCAGAGGTCACATTCCACATTGATGATGACGTTCTGGCCTACACGCGGTCC
GTTGCGTCACGTCAAAGTGATCTCCATGATGCGTGGGCTTCAGCCTACAACGCATGGCGCGACTCGGGCCACGAAGGTGT
CACACTATTCGACCGGCTCCAGGCTCGTGAACTACCAGCGAACTGGCACGATGCGCTTCCAGTGTTCGATGCTGGAACTG
ACCTGGCAACTCGTGCGGCTTCTGGGAAGGTCCTGTCTGCCCTTGCTCCCGTGCTACCAGAACTGTGGGGCGGCTCAGCA
GATCTTGCCGGTTCGAACAACACGACAATGGCAGGAGAGCCCTCCTTCCTCCCCGAACACCGGTCAACTCGTTCGTTCTC
CGGGAATCCATACGGACGGACCTTGCACTTTGGGATCCGCGAGCACGGAATGGGGGCAATCCTCAATGGGATCGTGCTCC
ACGGAGCGACGCGCGCCTACGGTGGAACCTTCCTTGTCTTCTCCGACTACATGCGCCCAGCCGTTCGTCTCGCTGCGCTC
ATGGAAATCCCCACGATCTTCGTGTGGACACACGATTCCATTGGAGTCGGAGAAGATGGCCCAACGCACCAGCCCATCGA
GCACCTCGCCGCTCTGCGCGCAATTCCAGGGCTCGACGTTGTTCGCCCAGGTGACGCGAACGAAGTCGCATGGGCTTGGA
AGACAATCATCGAGAAAACCGACCGTCCCGCTGGCATCATCCTGACACGCCAGAACATCCCAACCTATGAGCGTGGCGAA
GGTGAAGCAACTGGACAGACCTTCGCGGCTGCATCAATGGTTGAGAAGGGTGCATACACCCTCATTGACGCCAACGGCGA
TGTGGATGTTCTTCTGCTAGCAACAGGATCCGAAGTTCAGCTGGCAGTTGCCGCGCGTGAAGCACTCCAGGCCGAAGGAA
TCGGTGCCCGTGTGGTATCGATCCCCTGCCTTGAATGGTTTGCGGAACAAGATGAGTCTTACCGTGAGTCAGTCCTCCCC
TCGACTGTGAAGGCACGTGTCTCAGTCGAAGCTGGATTGGGACTGGGGTGGCGTGAACTGGTTGGTGACGCTGGCCGTAT
TGTATCCCTCGAGCACTACGGTGCATCCGCTGACGCTAAAACCCTCTTCCGCGAGTTTGGGTTCACGCCCGAAGCTGTGG
CACAAGCAGCACGCGATTCACTCGCAGCAGTGCGTGGCTAA

Protein sequence :
MNAFTPTANKLEWSELDDRAVTSIKALAADAVEKVGNGHPGTAISLAPAAYLLFQKVMRHNPADPQWVGRDRFVLSAGHS
SLTIYLQLFLAGYGLEMDDIASLRTWGSKTPGHPEYGHTEGVEITTGPLGQGLASAVGMAFAARRERGLFDPETADGESA
FDHNVYVIAGDGDLQEGVTSEASSLAGHQELGNLVVIYDQNHISIEDDTDVSFSEDVLARYESYGWHVQRVDWTHGGTEY
SEDVDALYSAIQEANKVTNKPSIIALRTIIGWPSPTKQNTGGIHGSALGGSEVAGLKEALGLDPEVTFHIDDDVLAYTRS
VASRQSDLHDAWASAYNAWRDSGHEGVTLFDRLQARELPANWHDALPVFDAGTDLATRAASGKVLSALAPVLPELWGGSA
DLAGSNNTTMAGEPSFLPEHRSTRSFSGNPYGRTLHFGIREHGMGAILNGIVLHGATRAYGGTFLVFSDYMRPAVRLAAL
MEIPTIFVWTHDSIGVGEDGPTHQPIEHLAALRAIPGLDVVRPGDANEVAWAWKTIIEKTDRPAGIILTRQNIPTYERGE
GEATGQTFAAASMVEKGAYTLIDANGDVDVLLLATGSEVQLAVAAREALQAEGIGARVVSIPCLEWFAEQDESYRESVLP
STVKARVSVEAGLGLGWRELVGDAGRIVSLEHYGASADAKTLFREFGFTPEAVAQAARDSLAAVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-123 44
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-124 43