Gene Information

Name : Dbac_0354 (Dbac_0354)
Accession : YP_003156897.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 418864 - 419613 bp
Length : 750 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase AAA; KEGG: dde:Dde_0731 ATPase

DNA sequence : 
ATGGATATCCACCATATCGTCCGCGTGGTCGCAGTGACCAAGACCTTCTCTCTGGGCAAGATGCCGGTGCAGGTTTTAAA
AGGGGTGGACCTTGAGGTCGAGGCCGGGGAATACCTGTCCATCATGGGCCCTTCCGGTTCTGGAAAAAGCACCCTCTTCA
ACATGATCGGCGGACTGGACAAGCCCACCAGCGGCCGCGTGTTCATCGACGAGGTCGATATCTCCCAGCTTGACGCCTAC
GAACTGGCCTGGCTCAGGAACCGCAAGATCGGCTATATTTTTCAGACCTTCAATCTCATCCCGGTCATGAGCGCGCTGGA
AAACGTCACCCTGCCGATGATTTTCGCCGGCATGTCCGGCGATGACGCGGTGGAAAAGGGGCGAGGGCTTTTAGACTTGG
TCGGGCTTGGAGAGCGGTTTCAGCATAAGCCTTCGGAGCTCTCCGGCGGCCAGCAGCAGCGGGTGGCCATTGCCCGCGCC
CTGGCCAACGACCCGGCCATCATCCTGGCCGACGAACCAACAGGCAATCTCGATTCCTCCACGGGCGGGGAGATCATCGC
CCTGCTTCAGAAAATGAGTCAGCAGCGGCAGGTCACGGTCATCTCCGCCACCCACGACTTCAAGATGCTCAACGTATCCG
ACCGGGTGGTCTGGATCCGGGACGGACGCATCGACAAGATCGAACACCGTGACGAACTCAGCATCTCCATCGGCACCATC
CAGGAGCGTCATGAGTCCGCGCATTCATAA

Protein sequence : 
MDIHHIVRVVAVTKTFSLGKMPVQVLKGVDLEVEAGEYLSIMGPSGSGKSTLFNMIGGLDKPTSGRVFIDEVDISQLDAY
ELAWLRNRKIGYIFQTFNLIPVMSALENVTLPMIFAGMSGDDAVEKGRGLLDLVGLGERFQHKPSELSGGQQQRVAIARA
LANDPAIILADEPTGNLDSSTGGEIIALLQKMSQQRQVTVISATHDFKMLNVSDRVVWIRDGRIDKIEHRDELSISIGTI
QERHESAHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dbac_0354 YP_003156897.1 ABC transporter NC_012469.1.7686878. Protein 1e-44 47
Dbac_0354 YP_003156897.1 ABC transporter CP001581.1.gene798.p Protein 7e-41 46
Dbac_0354 YP_003156897.1 ABC transporter NC_008702.1.4606598. Protein 3e-39 45
Dbac_0354 YP_003156897.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 43