|
Name : Dbac_3384 (Dbac_3384) Accession : YP_003159872.1 Strain : Desulfomicrobium baculatum DSM 4028 Genome accession: NC_013173 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3818449 - 3819957 bp Length : 1509 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase DNA sequence : TTGACAAAAGATCAGACCAATGTCCCAAGCGAAAAGCAGCTGCTTCGCCACCGCAAGGAAAAGGCGCAGTTTCTGCTTGA TGCGGGCATCCCTTTATATCCCAATGATTTTCGCCGCTCTGCAGAAATCGGCGACGTTCTTGAGGCGCATGGCGAAAAGG ACGAAAACGTCCTCCTCCAGGAAAACCTGACCTTTGCTCTGTGCGGCCGGATCATGGCCCATCGTTCCTTTGGCAAGGCG ACATTCTTTCATATTCAGGACACCAGCGGCAAAATCCAGGTTTACGCCCAGCGCGATGATCTTGGAGTTGAACAATATGG CGTGTTCAAAAAATTCGAAATCGGCGACATCGTCGGTGTCAGCGGCGCCCTTTTTCGCACCAAGACCGGGGAATTGACCA TAAAATCCGCTGCGGTGCGCCTCCTGTCCAAGTCCATGCGTCCGCTGCCGGAAAAATACCACGGTCTGAAAGATGTCGAG ACGCGGTATCGCCAACGCTACGTGGACCTCTTGGTCAACGACCGTGCCCGTGACATTTTCCGCAAGCGCACGGCCATCGT GCAGTTCATCCGCAATTTCCTGAACGAGCGCGGATTTCTGGAAGTGGAAACGCCCATGATGCAGCCCATCGCCGGCGGCG CCACGGCCAAGCCTTTCCGCACGCACCACAACGCCCTCGACATGGACCTTTTCCTGCGTATCGCTCCCGAGCTTTACCTC AAGCGCTTGCTTGTGGGCGGATTTGACCGGGTCTACGAGATCAACCGCAATTTCCGCAACGAGGGCATCGACACCCGCCA CAATCCCGAATTCACCATGATCGAATTCTATTGGGCGTATGCGACCTTCGTCGACCTCATGGACCTGACCCAGGAACTCC TTGGCGATTTGGCCAAATCCGTCTGCGGGACCCATCTGGTGGAATATCAGGGCAATGTCATCGACCTTCAGGATGGCTGG GTGCGCATGCCTTTCCACGAATCCCTGGAAATCATCGGCGGCGTATCCCCTGAAATATACCGCGATTACGACAAGTGCAA AGATCTGGCCCAGAAACTGGGCGAGGCCGTGCACCCCAAGGAGAAGCTGGGAAAGCTCCAGGCCAAGCTCTTCGACAATC TGGTCGAGCCCAAGCTGATCCAGCCGCACTTCATTTATCACTATCCGACAGACATATCCCCCCTGTCCCGCAAGAACGAT GCGAATCCCGAAATCACGGATCGATTCGAGCTGTTCATCTGCGGGCAAGAAATGGCCAATGCCTTTTCCGAACTGAACGA TCCATATGACCAGAAGGATCGCTTCGAGGAACAGGTACGGGAAAAGGCCGCCGGCGACGACGAAGCCCACGCCATGGACG AAGACTACATCCGCGCCCTGGAATACGGCATGCCTCCGGCTGCCGGACAGGGCATCGGCATTGATCGGTTGGTCATGCTG CTGACGGATTCTCCGTCCATCCGGGAAGTCATCCTCTTCCCGCTGCTGCGGCCCGAAATCACCGGCTAG Protein sequence : MTKDQTNVPSEKQLLRHRKEKAQFLLDAGIPLYPNDFRRSAEIGDVLEAHGEKDENVLLQENLTFALCGRIMAHRSFGKA TFFHIQDTSGKIQVYAQRDDLGVEQYGVFKKFEIGDIVGVSGALFRTKTGELTIKSAAVRLLSKSMRPLPEKYHGLKDVE TRYRQRYVDLLVNDRARDIFRKRTAIVQFIRNFLNERGFLEVETPMMQPIAGGATAKPFRTHHNALDMDLFLRIAPELYL KRLLVGGFDRVYEINRNFRNEGIDTRHNPEFTMIEFYWAYATFVDLMDLTQELLGDLAKSVCGTHLVEYQGNVIDLQDGW VRMPFHESLEIIGGVSPEIYRDYDKCKDLAQKLGEAVHPKEKLGKLQAKLFDNLVEPKLIQPHFIYHYPTDISPLSRKND ANPEITDRFELFICGQEMANAFSELNDPYDQKDRFEEQVREKAAGDDEAHAMDEDYIRALEYGMPPAAGQGIGIDRLVML LTDSPSIREVILFPLLRPEITG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-117 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dbac_3384 | YP_003159872.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-118 | 52 |
