Gene Information

Name : Dbac_3316 (Dbac_3316)
Accession : YP_003159804.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 3748987 - 3749451 bp
Length : 465 bp
Strand : +
Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: dvl:Dvul_2153 SsrA-binding protein

DNA sequence :
ATGTGCGCCAAGCCCACAGGCATCAAGATCATCGCGGCCAACCGCAAGGCCCGTCACTTTTACGAACTGCTCGACTTCAT
CGAGGCCGGGATCATGCTGACCGGCTCCGAGGTCAAATCCCTGCGTGACGGAAAGGTCAACTTCATGGACGGCTACGTGC
GCATCTCGGACGGCGAGGCCTTTCTTTCGGGCGTGCACATCTCCACCTACGCCAACGCCGGATACGCGCAGCATGTCCCG
GACCGGGAGAGAAAGCTGCTCATGCACCGTCATGAGATACATTCGCTCAAATCAAAGATGGAGCAGAAGGGGCTGACCCT
GGTGCCGACCAAACTGTATTTCAAGGACGGCAAGATCAAGATCGAGCTGGCCCTGGCCAAGGGCAAGAAGGTCTACGACC
GGCGCGAGGATTTGAAGCAGAAAGCTGTGAACCGCGACACCGAGCGGGAGATGAACCGGGCCTGA

Protein sequence :
MCAKPTGIKIIAANRKARHFYELLDFIEAGIMLTGSEVKSLRDGKVNFMDGYVRISDGEAFLSGVHISTYANAGYAQHVP
DRERKLLMHRHEIHSLKSKMEQKGLTLVPTKLYFKDGKIKIELALAKGKKVYDRREDLKQKAVNRDTEREMNRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 9e-36 49
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-29 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-24 47