Gene Information

Name : Dbac_3290 (Dbac_3290)
Accession : YP_003159778.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3724210 - 3725067 bp
Length : 858 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: bpl:BURPS1106A_3886 transposase B

DNA sequence :
GTGGTAGGCGCACCCGCCCGACGCCTCCAGGTGGCATACGCCAGGAGTCGCGGACTTTCACAACGCAGGGCGTGTGCGCT
GTTATCCACTTCCCGGTCGTCGCTCCACCACTACGAGTCACGGCTGGAGGCCCGGGACAAGCCACTGATGGCGGCTATGA
CAGATCTGGCTGCGACGTATCCGCGCTTTGGATATCGCCGGATCAACGTGTTCATGGAGCGTCTGGGGCATGTCATGGGC
GCCGACAAGGCGTTCCGCCTGTGGTCCAAGGCCGGGTTGCAGGTGCCCAGGAAGCGGCCTCGGAAACGAGTGGCGGCGTC
CCGCCCGAGACCGCAACTGCCGATGGGAGCAAACGAACTGTGGGCGTACGACTTTGTCTATGACGCCTGCGCCAATGGTC
AGCAGATCAAATGCCTGACTGTGGTAGACGAATACACGCGGGAATGCCTGGCTATAGACGTTGCCGGCAGCATCAGATCG
GGCCGGGTGATCGAGGTGCTGTCCCGCCTGATCAGCGAACGTGGAGCCCCTCTGAGCCTGCGTTCTGACAACGGACCGGA
GTTCGTGTCGAAGGCGCTGCTCAGATGGGCGGCTCAGGAGTCTCTGGATCTGGCGCTGATTGAGCCTGGGAAGCCATGGC
AGAACGGTTTGAACGAGAGTTTTAACGGCAAATTTCGCGATGAGTGTCTGTCGATGGAATGGTTCCGGTGTCGGTCCGAG
GCGCGGGTTGTGATCGAGGAATGGAGGCGGCACTACAACTCCATTCGTCCGCATTCAAGCCTGAACAACATGACGCCAGA
ACATTTCTGTCGGCAGTATGGGAAAAACCTGAACCGTGGGGAAACTCTCAAGAATTGA

Protein sequence :
MVGAPARRLQVAYARSRGLSQRRACALLSTSRSSLHHYESRLEARDKPLMAAMTDLAATYPRFGYRRINVFMERLGHVMG
ADKAFRLWSKAGLQVPRKRPRKRVAASRPRPQLPMGANELWAYDFVYDACANGQQIKCLTVVDEYTRECLAIDVAGSIRS
GRVIEVLSRLISERGAPLSLRSDNGPEFVSKALLRWAAQESLDLALIEPGKPWQNGLNESFNGKFRDECLSMEWFRCRSE
ARVVIEEWRRHYNSIRPHSSLNNMTPEHFCRQYGKNLNRGETLKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 9e-55 48