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Name : Dbac_3268 (Dbac_3268) Accession : YP_003159758.1 Strain : Desulfomicrobium baculatum DSM 4028 Genome accession: NC_013173 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3700914 - 3702803 bp Length : 1890 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short- chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: sfu:Sfum_3360 pol DNA sequence : ATGAAAGTGCCCCGGCTGCTGGCGAATAAAAACCTCTACCTCATGCTCCTCGGCGAGAGCGGTCTCTTTGCCATGGCTCT GGTCATGGCTTTTTTGCTGCGTTTCGAGTTTGACATCCCGGCGGATTTTTTCCGGCAGATGGTAGGGCTTTTGCCGGTGG CCGTGGCTCTCAAAGTGGTCTTCTTCTGGGTCTGCGGGCTGTATCGGGGCATGTGGCGCTATACCGGCCTGGCCGATCTG TGGAAGATCGGGCGCGCGGTGTTCATGGCTGAGGTGGCGCTGATCATCTACGTCGCGTTTACGTCGCATTTTCAGGGCTA TCCGCGCTCCGTGTTTATCCTGGATCCGTTGCTGGCCTTTGTTTTTGCTTGCGGAGCCCGGGTGCTGATCCGTTCCCTGT ATGAGACTTCCGCGCAGCCGAAAGACTGGCTGTTTGCGCTGCTACCTGAAAGGTTCTGCGCTCCCGCCTCCGGGATACGG GCGCTCATTGTCGGGGCTGACGCGGATGGCGCGCGCATCGCCAAGGAAATTTTGGATGTCCGCGATTCCGGACTGCATCT GGTGGGTTTTGTTGATGACGACCCCGCCCGCATCGGGCGCAATATCCATGGCCTGCCCGTATATGGGCCGCTGGCGGCGC TGGTGAGCGTGGCCCAGATGACCCGCGCCGAGGAAATTTTGGTCAGCGCGGGCCAAGCGGGTGGCCATCTGCGCGAGATC GTGGATGCCTGCGAGTCCGCCCAGCTCGGCATCAAGAAACTGCCCGCCCTGGCCGACATCGCCAGCGGCAAGGTCTCGGT CAAGGCCCTGCGCGACGTGCGCTACGAGGATCTGTTGGGGCGAGAGGAAGTGCACCTGGACGAGGCCGGGATCAAGGGCT ACCTCGCGGACAAGGTGGTGCTGGTCACCGGGGCCGGGGGCTCCATCGGTTCGGAGCTCTGCCGCCAGATCATCCGCTTT GGTCCGCGCCTGCTCGTCCTGTTCGATGCCGGTGAGGAGAATCTGTACTCCATCGAGATGGAACTCCTGCATCAGCACGG GTTCACGCGCTACGTCACGGTGCTGGGGCAGGTGCAGGACGCGGCCCTGGTGGACGCGGTTTTCGCGGCCCGGCAGCCGC ATGTCGTGTTCCATGCCGCGGCCTACAAGCATGTGCCCATGCTCGAAGGCAACCCCTGGCAGGCCGTGACCAACAATATC GTCGGCTCGCGCACGGTCATGGAGGCTTCGGTCAGGCATGGCGCAGGGCGTTTCGTGCTTGTGTCCACGGACAAGGCTGT GCGTCCGACGAATGTCATGGGCGCGTCCAAGCGCGTGGCGGAGCTGCTCATGCATGGCTTCCAGGGCGGGGAGACGACGT TCATGGCCGTGCGCTTCGGCAATGTGCTCGGCTCGTCGGGCTCGGTCATCCCGCTCTTTCGCAGCCAGATCGAACGAGGC GGGCCGGTCACTGTCACTCACCCCGAAGTGACCCGCTATTTCATGACCATCCCGGAAGCGGCCCAGCTCATCGTCCAGGC CGGAGCCCTGGGACGGGGCGGGGAAATTTTCGTACTCAAAATGGGCCAGCCCGTACGCATCGCCGACCTAGCCAGGGACC TTATCATCCTGTCAGGTAAGGATCCGGCCGAAATTGAAGTGAAGTTCACGGGCCTGCGGCCGGGGGAGAAGCTTTACGAG GAGCTAATCACCGCAGGAGAGGGCGTGCTGGAAACCGGGCATGAGAAGATCATGGTGTTGCGCTCCGAAAAAACTCAGAT AGAAAACGATGAAAAATTAGTGACCCTGCTAGAGGCTGCGCGGTTTTTTGAAGCTGAGGGGGTCAGACGGGGGCTTCAGG ATTTGGTACCAGAATATACTCCCGTAAGTAATGCGGCCGAGGTGCATTGA Protein sequence : MKVPRLLANKNLYLMLLGESGLFAMALVMAFLLRFEFDIPADFFRQMVGLLPVAVALKVVFFWVCGLYRGMWRYTGLADL WKIGRAVFMAEVALIIYVAFTSHFQGYPRSVFILDPLLAFVFACGARVLIRSLYETSAQPKDWLFALLPERFCAPASGIR ALIVGADADGARIAKEILDVRDSGLHLVGFVDDDPARIGRNIHGLPVYGPLAALVSVAQMTRAEEILVSAGQAGGHLREI VDACESAQLGIKKLPALADIASGKVSVKALRDVRYEDLLGREEVHLDEAGIKGYLADKVVLVTGAGGSIGSELCRQIIRF GPRLLVLFDAGEENLYSIEMELLHQHGFTRYVTVLGQVQDAALVDAVFAARQPHVVFHAAAYKHVPMLEGNPWQAVTNNI VGSRTVMEASVRHGAGRFVLVSTDKAVRPTNVMGASKRVAELLMHGFQGGETTFMAVRFGNVLGSSGSVIPLFRSQIERG GPVTVTHPEVTRYFMTIPEAAQLIVQAGALGRGGEIFVLKMGQPVRIADLARDLIILSGKDPAEIEVKFTGLRPGEKLYE ELITAGEGVLETGHEKIMVLRSEKTQIENDEKLVTLLEAARFFEAEGVRRGLQDLVPEYTPVSNAAEVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-84 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dbac_3268 | YP_003159758.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 5e-77 | 42 |
