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Name : Dbac_3008 (Dbac_3008) Accession : YP_003159499.1 Strain : Desulfomicrobium baculatum DSM 4028 Genome accession: NC_013173 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3400866 - 3402176 bp Length : 1311 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: dde:Dde_3187 UDP-glucose/GDP-mannose dehydrogenase family protein DNA sequence : ATGATCACTTTCGAAGATATCGCATCCGGCGTCTCAGAAGTTGCCGTGGTGGGCCTTGGCTATGTCGGCCTGCCCTTGGC CGTGGCCCTTGGCGACCACTTCAAGGTCATCGGTTTTGATATTTCCCGGCCCCGCATCGAAGAACTGCGCGAAGGCAAGG ATTCCACGCGCGAGGTAGCCCCTGAAAGGCTGGCCGGCGCCCGGGTCGAGTACACCGACGATCCCGCACGGCTTGCCGGG GCCGGAGTCATCGTGGTGGCCGTGCCGACGCCCATCGACGGCAATCGCAAGCCGGACCTGCGGCCCGTGGTCGGCGCCAC CGCCACTGTCGGCGCGCACATGCGGGCAGGCTGCATCGTCGTTTATGAGTCGACGGTCTACCCAGGGCTGACGGAAGAAA TCTGCGTACCGCTGCTGGAAGAAAAATCCGGCCTGACCTGCGGCAGGGATTTCACGGTGGGCTATTCCCCGGAGCGCATC AACCCCGGCGACAAGGTCCACACCCTGGAGAGCATCGTCAAAGTGGTCGCAGGCCAGGATCAGACCACGGCAGACCTGCT CGCCCGTTTCTATGCCTCCATCGTCAGGGCCGGCGTGCACCGCGCTTCGAGCATCAAGGTCGCGGAGGCCGCCAAGGTCA TCGAGAACACCCAGCGCGATCTGAACATCGCCCTCATGAACGAACTGGCGCTCATTTTCGACCGCATGGGCATCGACACG AACGAAGTGCTTGAGGCCGCCGGCACCAAATGGAATTTCCTGCCCTTCCGGCCGGGTCTGGTCGGCGGGCACTGCATCGG AGTGGACCCGTACTACCTGACCTTCAAGGCCGAATCCATCGGCTTCCATCCGCAGGTCATCCTCGCCGGCAGACGCATCA ACGACGGCATGGGCAAATTCATCGCGGAGAAGACCATCAAAGCCATGATCGACGCAGGATGCCTGATCAAAGGCGCCCGC GTCGGACTGCTCGGCCTGACCTTCAAGGAAGATGTGCCGGATTTGCGCAACAGCCGGGTGGAAGACATCATCCACGAACT TTCCGACTACCACGTCGATGTCCTGGTTCACGATCCTCTGGCCGACGCGGCGGAGGCCAAAGAGGAATACGGGGTGGATC TTTTGCCCTTGCCGGAACTTAATCAGCTCGACGCCCTCATCCTGGCGGTGTCGCATGCCGAATTCGCGCACCTTGACGCT GGCCGGATCGCGACCATGTTCAAAAACCCGGAAAATGGGATCGTCATTGATGTCAAGGGGTTTCTGGACCGGGACGCCTT GTCGCGGAACTTCAGATACTGGCGGCTCTAA Protein sequence : MITFEDIASGVSEVAVVGLGYVGLPLAVALGDHFKVIGFDISRPRIEELREGKDSTREVAPERLAGARVEYTDDPARLAG AGVIVVAVPTPIDGNRKPDLRPVVGATATVGAHMRAGCIVVYESTVYPGLTEEICVPLLEEKSGLTCGRDFTVGYSPERI NPGDKVHTLESIVKVVAGQDQTTADLLARFYASIVRAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRMGIDT NEVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTFKAESIGFHPQVILAGRRINDGMGKFIAEKTIKAMIDAGCLIKGAR VGLLGLTFKEDVPDLRNSRVEDIIHELSDYHVDVLVHDPLADAAEAKEEYGVDLLPLPELNQLDALILAVSHAEFAHLDA GRIATMFKNPENGIVIDVKGFLDRDALSRNFRYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-116 | 59 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 54 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-98 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dbac_3008 | YP_003159499.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-98 | 54 |
