Gene Information

Name : Dbac_1893 (Dbac_1893)
Accession : YP_003158400.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2186625 - 2187302 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase AAA; KEGG: gsu:GSU0678 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAATGATTCCATCATAAGAACCCAGGGTCTGACCAAGACCTATGGCCAGGGCGCAAGCCTGACCCAGGCCCTGCGCGG
CGTGGACCTTGAAATCGAGCGGGGCGGGCTGACCTGCATCGTCGGCCCCTCCGGGCACGGCAAGTCGACCCTCATGCATC
TGCTCGGGGGGCTGGACCGGCCAAGCAGCGGCCGGGTCCAGCTTGACGGACAGAACATGTTCGATCTTCGCGACAGTGAG
CTGGCCGCTTTGCGCTCGCGCAAGATCGGGTTCGTGTTCCAGTTCTTCAATCTTCTGCAGAGCCTCACGGCCCGTGAGAA
TGTGGAAATGGCCCTGATGCTGGCCGCTGCGTCCGAAACCCGGCAAAAAGAACGGGCCGAGGAGCTGCTGGAACTGGTCG
GACTCTCGGACAAGATAAATGCCAAGCCGGGGCAGCTCTCCGGCGGGCAGCAGCAGCGGGTGGCCATTGCCCGGGCCCTG
GCCAATGACCCTCCGGTGCTGCTCATGGACGAACCCACGGGGAACCTGGACTCGGCGGCGGAGGCGGAGGTGCTGAACGT
GCTTGAGGATCTCGTCCGCCAGGGCAAGACCATCATCCTGGTCACGCACAGCGCCGAAATCGCCGCCCGGGCCGACACCC
TTGTGCGGGTGCGGGATGGCGTGATCTGTCATGACTGA

Protein sequence : 
MNDSIIRTQGLTKTYGQGASLTQALRGVDLEIERGGLTCIVGPSGHGKSTLMHLLGGLDRPSSGRVQLDGQNMFDLRDSE
LAALRSRKIGFVFQFFNLLQSLTARENVEMALMLAAASETRQKERAEELLELVGLSDKINAKPGQLSGGQQQRVAIARAL
ANDPPVLLMDEPTGNLDSAAEAEVLNVLEDLVRQGKTIILVTHSAEIAARADTLVRVRDGVICHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dbac_1893 YP_003158400.1 ABC transporter NC_012469.1.7686878. Protein 2e-45 47
Dbac_1893 YP_003158400.1 ABC transporter NC_008702.1.4606598. Protein 2e-36 45
Dbac_1893 YP_003158400.1 ABC transporter CP001581.1.gene598.p Protein 1e-41 44
Dbac_1893 YP_003158400.1 ABC transporter NC_012469.1.7685735. Protein 3e-38 44
Dbac_1893 YP_003158400.1 ABC transporter CP001581.1.gene798.p Protein 3e-43 41