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Name : Dbac_1827 (Dbac_1827) Accession : YP_003158334.1 Strain : Desulfomicrobium baculatum DSM 4028 Genome accession: NC_013173 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2081691 - 2083136 bp Length : 1446 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dvu:DVU0959 replicative DNA helicase DNA sequence : ATGCAACCGAAGAAGCCGCAGAGTAAGTTCGGGCAGCGCCTCGGAACTAAAATCCAACCAGAGGAGGCCTTGCAAAAGGC CTCTTCTGATTTGTTGCGCAGAGTCCCCCCTCATAACACCGAAGCCGAACAGGCGGTGCTGGGCGGGGTTTTCCTGCGCA ACGATATTTTTCATACCCTGGTCGATACGATCAACGACGAGGATTTCTACTCGCCGGTGCATCGCATCATCTATCAGGCC TTCCAGGAACTGTACCGCCGCCGCGAGCCCGTGGACCTGGTCACCGTGGCCGAATATCTGCAGACCAAGGGGCAGCTCGA CGAGGTCGGCGGCACGGTTTACCTGGCCTCCCTGGCCGAATCCGTGGCTTCGGCGTCCAATGCCGTCTTTCACGCTCAGA TCGTGCGTGACAAGTCCGTGCGCCGCAGGCTCATTCAGACCTCCTCCGAGATCCTGACCAGCTGCTTTGAAGCCGGCGAG CAGACGGAATCCCTGCTGGACCAGGCCGAGCAGCAGATTTTCTCCATTGCCGAATCCAAGGGCAAACCCGTCTTCATGAG CAGCAAGGATCTGGTCCAGCGGGTCTTCGAACAGTTGGAGGCGCGGGCAGGGCAGGGCGAACTGGTCACGGGTGTGCCCA CGGGCTACACGGATTTCGATCAGATGACCGCCGGACTGCAAAAGTCCGACCTGATCATTCTCGCGGCCCGTCCGTCCATG GGCAAGACCGCTCTGGCGCTGAACATGGGCATGCGCGCGGCCATTCAGCACGATGTGCCCGTGGCGGTCTTTTCCCTTGA GATGTCCATGGACCAGCTCATGATGCGTCTTCTGGGCTGTCACGGCCGGGTGGACCTGAGCCGCCTGCGCAGCGGGTATC TGAACGACGAGGACTGGAGCAGGCTCTATCAGTCCGCCGAGGACCTTTCCAGGGCACCCATCTACATCGACGACACTCCG GCTCTCTCAACCATGGAAATACGGGCCCGCAGCAGGCGCCTCAAGGCCGAGAAGGGCGTGGGGCTCATTATCGTCGACTA TCTGCAGCTCATGCGCTCCTCCCACAAGAGCGATTCCCGCGAACAGGAAATTTCGGATATCTCGCGTAATTTGAAAGCCC TGGCCAAGGAGCTTGAAGTGCCGGTCATCGCCCTGTCGCAGCTCAACCGCAAGGTCGAGGAGCGCTCCGACAAGCGGCCC ATGATCTCGGATTTGCGCGAATCGGGCGCCATCGAACAGGACGCCGACGTCATCGTCTTCATCTATCGTGATGCGGCCTA CAACAAGGCCGAGGACAATCCGAACAAGAATATCGCCGAGATCATCATCGGCAAGCAGCGTAACGGTCCTGTCGGAGCCA TCCGTCTGGGTTATTTCGGCCAGTACACCGTATTCGAGAATCTTACGGAAGTAGGTCTACCGTCCGAGGACGGCGGCGCG TACTGA Protein sequence : MQPKKPQSKFGQRLGTKIQPEEALQKASSDLLRRVPPHNTEAEQAVLGGVFLRNDIFHTLVDTINDEDFYSPVHRIIYQA FQELYRRREPVDLVTVAEYLQTKGQLDEVGGTVYLASLAESVASASNAVFHAQIVRDKSVRRRLIQTSSEILTSCFEAGE QTESLLDQAEQQIFSIAESKGKPVFMSSKDLVQRVFEQLEARAGQGELVTGVPTGYTDFDQMTAGLQKSDLIILAARPSM GKTALALNMGMRAAIQHDVPVAVFSLEMSMDQLMMRLLGCHGRVDLSRLRSGYLNDEDWSRLYQSAEDLSRAPIYIDDTP ALSTMEIRARSRRLKAEKGVGLIIVDYLQLMRSSHKSDSREQEISDISRNLKALAKELEVPVIALSQLNRKVEERSDKRP MISDLRESGAIEQDADVIVFIYRDAAYNKAEDNPNKNIAEIIIGKQRNGPVGAIRLGYFGQYTVFENLTEVGLPSEDGGA Y |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-74 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-81 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-80 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-76 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-75 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-69 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-69 | 43 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 4e-67 | 41 |
