Gene Information

Name : Dbac_1464 (Dbac_1464)
Accession : YP_003157974.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 1652896 - 1653915 bp
Length : 1020 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: dde:Dde_0358 NAD-dependent epimerase/dehydratase family protein

DNA sequence : 
ATGCATAAAAAAATACTCCCTCTTCTGGAATCCAAACAACGCTGGCTCGTCACCGGCGTTGCCGGATTCATCGGCTCGAA
CCTGCTGGAAACCCTGCTGTGCCATGATCACGAGGTCACGGGTCTCGATAATTTTTCCACCGGCCACAGGCACAACCTGG
ACGAAGTCCAAGGCAGCGTGACCCCCGAGCAGTGGGCCCGTTTCCGCTTCATCGAAGGCGACATCCGGGACCTGCCCACC
TGCATGGAGGCCTGCAAGGGCGCAACCTACGTCCTGCACCAGGCCGCGCTTGGCTCGGTGCCCCGCTCCATTGTCGATCC
TCTGCTGACCAACGCCAACAACGTGACCGGCTTTCTGAACATGCTGGTCGCCGCCAAGGACAGCACGGTCAGGCGCTTCG
TGTACGCGGCCTCAAGTTCCACCTACGGCGATCACCCCGGCTTGCCCAAGGTCGAGGACACCATCGGCAAGCCCTTGTCT
CCCTACGCCGTGACCAAGTACGTGAATGAGCTGTATGCCGAGGTCTTCCTCAAAACCTATGGCCTGGACAGCGTGGGGCT
GCGCTATTTCAATGTCTTCGGAAAACGCCAGGATCCCGAGGGCGCCTATGCGGCGGTCATCCCCAAATGGTTCGCGGGCC
TCTTGCGCGGCGAGACTGTCTGGATCAACGGCGACGGTGAAACAAGCCGCGATTTCTGCTTCATCGACAATTGCGTGCAG
GCCAACATCCTGGCAGCATGCGCCACGGGTCCGGACGTTGCCGGGAGCGTGTTCAATGTCGCCTTTGGTCAGCGCACCAC
CCTTGGCGAGCTGTTTTATCTCATCCGCGACGAGGCCGCCAAATTCATGCCGGCCTGCGCGGAAGCGTTGCCCTCGCACC
GGGATTTCCGGGCCGGGGACGTCCGGCACTCCCTGGCCGATATTTCCAAAAGCCGCAGACTGCTCGGCTACGACCCCGCC
TATGACGTGCGCGAAGGCCTGGCCAAGGCCGGCGAGTGGTACGCCAGGCATCTGACCTAG

Protein sequence : 
MHKKILPLLESKQRWLVTGVAGFIGSNLLETLLCHDHEVTGLDNFSTGHRHNLDEVQGSVTPEQWARFRFIEGDIRDLPT
CMEACKGATYVLHQAALGSVPRSIVDPLLTNANNVTGFLNMLVAAKDSTVRRFVYAASSSTYGDHPGLPKVEDTIGKPLS
PYAVTKYVNELYAEVFLKTYGLDSVGLRYFNVFGKRQDPEGAYAAVIPKWFAGLLRGETVWINGDGETSRDFCFIDNCVQ
ANILAACATGPDVAGSVFNVAFGQRTTLGELFYLIRDEAAKFMPACAEALPSHRDFRAGDVRHSLADISKSRRLLGYDPA
YDVREGLAKAGEWYARHLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-100 60
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-100 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dbac_1464 YP_003157974.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 9e-101 60