Gene Information

Name : Dbac_1457 (Dbac_1457)
Accession : YP_003157967.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1645960 - 1646838 bp
Length : 879 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dde:Dde_1971 tyrosine recombinase XerD subunit

DNA sequence :
ATGCACGAAGAAATCGACGCCTATCTCCAGCATCTGACCGTCATTCGCGGATTGGCCGAAAAAACCGTCGAGGCCTATGG
TTCGGATCTGCTTTTTTTCCGGGATTTTTTGTCGGAACTTGGCGGCAGCCTGCATCAGATCGATGAACACACCCTCTTCC
TTTATATGGTGCATCTGCGGCGCAAGGGTCTGAAAAACACGTCCATGGCCCGCAACATCTCAAGTTTACGCGGTTTTTTC
GAATTTCTGGTGCAGGAACGCCACCTCGCCTCCAGCCCCGCCGCTCTGCTGGACAGCCCCAAACTGGTCCGCAAACTGCC
GGAAGTCCTGTCCCGGGATGAGGTCACCGCCCTCTTGGACCGCCCCGCCTTGAACACCCCGCTGGGTTTTCGCGACCGGA
CCATGCTCGAACTCCTCTACGCCTGCGGACTGCGCGTGTCCGAACTGGTCTCCCTGACCGCACCCGACTTTGATCCCCAG
GCCGGGCTTTTGCGCGTGCTGGGCAAGGGCAGCAAGGAGCGATACGTGCCTCTGCACGACTCCGCGGTCAGCTTCATGCT
CTCGTTCCTGCGCCAGTGGCGCCCCCTGTTCGGCCCCAAGACCGACACCGTATTTCTCAATCGCTCCGGCCTTGGCCTGT
CCCGACAGGGCGTCTGGAAGCTGCTGCGCCGCTACGCGCTGGAGGCCGGCATCACGCGTCCGGTCTCGCCGCACACTCTG
CGCCACTCGTTCGCCACGCACCTGCTGGAAGGCGGGGCCGATCTGCGCACCGTGCAGATCCTGCTCGGTCACAGCGACAT
CATGGCCACGGAAATCTACACCCATGTGCAATCGGCCCGCATGGTCGCCCTGCACCGCAAATTTCACCCCCGGTCCTAA

Protein sequence :
MHEEIDAYLQHLTVIRGLAEKTVEAYGSDLLFFRDFLSELGGSLHQIDEHTLFLYMVHLRRKGLKNTSMARNISSLRGFF
EFLVQERHLASSPAALLDSPKLVRKLPEVLSRDEVTALLDRPALNTPLGFRDRTMLELLYACGLRVSELVSLTAPDFDPQ
AGLLRVLGKGSKERYVPLHDSAVSFMLSFLRQWRPLFGPKTDTVFLNRSGLGLSRQGVWKLLRRYALEAGITRPVSPHTL
RHSFATHLLEGGADLRTVQILLGHSDIMATEIYTHVQSARMVALHRKFHPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-50 49
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-50 49