Gene Information

Name : Dbac_1351 (Dbac_1351)
Accession : YP_003157865.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1523250 - 1524884 bp
Length : 1635 bp
Strand : +
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: rsp:RSP_0701 peptide ABC transporter ATPase

DNA sequence :
ATGCCTTTGATCCCCGACACCGGAGCTAGTCCCACAGCGGCTAGCCGGACGCAGGACGAAGCCCTGTTGACCATTCGCAA
CCTGAGCGTTGATTTCTCCGTGGAGGATCGCACCGTCACCGCCGTGCAGGACGTGTCCCTATCCGTTTATCCCGGACGGA
CCTGCGCCCTGGTGGGGGAGAGCGGCTCTGGCAAGTCCGTGACCGCTCTGTCCATTTTGCGTCTGCTTCCGCCTGAGGTC
GCGCGCAGCAAGGGGGAGATTCTGTTCGAGGGGCGCGACCTCGCGCGTCTGGACGAAAAGTCCCTGCGCGAGGTGCGCGG
TGGACGCATCGGCATGATCTTCCAGGAGCCCATGACCTCGCTCAATCCCGTGCACGCTATCGGCCGTCAGATCGCCGAAA
GCGTGCTGTTGCACCAGCCTGGAGTTGACGCCAAGGCCCGCACCCTGGAGCTTCTGGAGCTGGTCGGCATCCCGGATGCG
GCCTCGCGTCTGAACAGCTTTCCCCATCAGCTCTCCGGCGGTCAGCGGCAGCGGGTCATCATCGCCATGGCCCTGGCCAA
CAATCCGGTGCTGCTGATCGCCGACGAGCCGACCACGGCCCTGGACGTGACCATCCAGGCCCAGGTGCTGGACCTCTTGA
AGGATTTGCAACGGCGACTGGGCATGGCCATCCTGCTCATTTCCCACGATCTGGGCGTGGTCCGGCACATGGCCGACGAA
GTGCACGTCATGCGCGAGGGCAGGATCGTGGAGAGCGGGCCGCGTGACGACATTTTCAAGAATCCGGGCCACCCGTACAC
GAAAACACTGCTGGCCAGCACCCCGTCGGGCAGGCCGGATCCCCTGCCCGAAGACGCGCCGCTCTTGATCGAGGCCAGCG
GAGTGCAGGTCTGGTTCCCGCAGGGCAAGACGCTCTTTGGCCGTCCCAAAAGTTTCATCAAGGCCGTGACCGACGCCGAA
CTTTTCATCCGTCAGGGCGAATCCCTGGGCGTGGTGGGGGAGAGCGGGTCCGGCAAGACCACCCTGGGGCTGGCCCTCTT
GCGCCTGCAGTCCTGCCGGGGAGTGATCGATTTTGACGGAGAGCGCCTTTCCGGCATGCGTGAAGGGCTGCTTCGAAGCT
TGCGCCGCAATTTTCAGATTGTCTTCCAGGACCCGTATGGCAGCCTCAGCCCGCGCATGACCGTCGGTCAGATCGTGGCC
GAGGGCCTGGACGCGCATCGCCTGGCCACGGGCACGGAGCGGGAGGAACGCATCGCCGAGATATTGGAAGCCGTGGATCT
CGACCCTGCCGCCATGCACCGTTACCCCCATGAATTTTCCGGCGGCCAGCGCCAGCGCATCTCCATTGCCCGGGCGCTCA
TCCTGCGGCCCAAATTCGTGGTTCTGGACGAGCCCACCTCGGCCCTGGACCGCACGGTGCAGTTCCAGATCGTGGAGCTT
CTGCGAGGCCTGCAGACCCGCTTCGGCCTGACCTACATGTTCATCACCCACGACCTGGCCCTGGTGCGGGCCCTGTGCCA
CCGCATCGTCATCATGAAGGAAGGACGGATCGTGGAGCAGGGGGCGACGGATGCGATCTTTGCGAGCCCGGTCCAGGAAT
ACACCCGCACCCTGCTGGCCGCCGCCCTGGAATAA

Protein sequence :
MPLIPDTGASPTAASRTQDEALLTIRNLSVDFSVEDRTVTAVQDVSLSVYPGRTCALVGESGSGKSVTALSILRLLPPEV
ARSKGEILFEGRDLARLDEKSLREVRGGRIGMIFQEPMTSLNPVHAIGRQIAESVLLHQPGVDAKARTLELLELVGIPDA
ASRLNSFPHQLSGGQRQRVIIAMALANNPVLLIADEPTTALDVTIQAQVLDLLKDLQRRLGMAILLISHDLGVVRHMADE
VHVMREGRIVESGPRDDIFKNPGHPYTKTLLASTPSGRPDPLPEDAPLLIEASGVQVWFPQGKTLFGRPKSFIKAVTDAE
LFIRQGESLGVVGESGSGKTTLGLALLRLQSCRGVIDFDGERLSGMREGLLRSLRRNFQIVFQDPYGSLSPRMTVGQIVA
EGLDAHRLATGTEREERIAEILEAVDLDPAAMHRYPHEFSGGQRQRISIARALILRPKFVVLDEPTSALDRTVQFQIVEL
LRGLQTRFGLTYMFITHDLALVRALCHRIVIMKEGRIVEQGATDAIFASPVQEYTRTLLAAALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-76 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 43