Gene Information

Name : Dbac_0134 (Dbac_0134)
Accession : YP_003156678.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 165179 - 165916 bp
Length : 738 bp
Strand : -
Note : KEGG: dvl:Dvul_0267 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
ATGCCTGAGGTCATCGCCATCATCCCGGCCAGATACGAAAGCTCCCGTTTTCCGGGTAAGCCCTTGGCCCTCATCCACGG
CAAGCCCATGTTCTGGCACGTCATGCGGCGCGCAGGCCTGTGCCCGCAGGTGGGCGCCGTGGCCCTGGCCACGGACGACG
AGCGCATCTTCAGCGCCGCCCGGGACTTCGGGCTCACCGCGCTCATGACCAGCCCAGGTCACGCCAGCGGCACGGACCGG
GTGCTTGAGGCCGCCCGGCTCCTGGGCGCGGCCCCGGACAGCGTCATCGTCAATGTCCAGGGCGACGAGCCGGCCTTGAA
CCCCGAAATGCTGACCGAACTGATCCAGCCCTTCGATGATCCGCACGTACACGTCACCACTTTGGGGCACATCATCAGCG
CCAAAGAGGCCGAGTCAGCGGACCGGGTCAAGATCGTACGCGCGGCAGATGGCCGGGCGCTCTATTTCTCCCGCGCCAAG
GTCCCCTTCGGACGCGACAACTCACCGGAATATATAGGACATATCGGCCTTTATGGACTGCGCATGCACGTCCTTGAAAA
ATTCAGCGCTTTGGGCGAGAGTCCCTTGGAGAAACTGGAAAAACTGGAACAGCTGCGGCTGCTCGAAGCCGGCATCCCCA
TCCATGTGGCCCTCACGCGGCACAAGAGCCACGGCGTGGACCGCCCAGAAGATCTGCCCACAGTCACAGCACTCATGCGA
GGAGAACATCATATATGA

Protein sequence :
MPEVIAIIPARYESSRFPGKPLALIHGKPMFWHVMRRAGLCPQVGAVALATDDERIFSAARDFGLTALMTSPGHASGTDR
VLEAARLLGAAPDSVIVNVQGDEPALNPEMLTELIQPFDDPHVHVTTLGHIISAKEAESADRVKIVRAADGRALYFSRAK
VPFGRDNSPEYIGHIGLYGLRMHVLEKFSALGESPLEKLEKLEQLRLLEAGIPIHVALTRHKSHGVDRPEDLPTVTALMR
GEHHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-31 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-30 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-31 45