Gene Information

Name : Dbac_1236 (Dbac_1236)
Accession : YP_003157755.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1365757 - 1366569 bp
Length : 813 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB

DNA sequence :
ATGCACAGCGAGCATGGCATCAGTGAGCGGCAGGCATGCGCTGCGCTGGGCCTTAGCCGGACTGTGTACCGGTATGAGCC
CAAACCGAAAGATGATTCGCCGATCATTGAAGCGCTTCTGGGACTGGTCGACCGGTATCCTCGTTACGGTTTCGGCAAGC
TGTTCGCGGTATTGCGCAGACACGGTTTTCGCTGGAACCATAAACGCGTCTACCGGGTATATTGTCTTTTGAAGATGAAT
CTCCGGCGCAAAGGCAAGAAGCGCCTGCCCTCGCGAAACCCGCAACCACTGGCGGTTCCGCCATGCGCGAATGTCTGCTG
GTCCATTGACTTCATGCATGACGCGCTGGCCAGCGGTCAGAGGTTTAGGACTTTCAACGTGCTGGACGACTTCAGTCGTG
AGTGTTTGGGGATTGAGGTGGATACGAATCTGCCAGCGGCAAGGATATTGCGGGTTTTGGATCGGATTGTGGCTTGGCGC
GGGCTTCCTGCCAAGCTGAGAATGGACAACGGGCCGGAGCTGATTTCCGTGCTGCTGGCCGACTGGGCCGAAAAGAACGG
CGTGGCATTGGAGTTCATCCAGCCAGGCAAGCCCACGCAGAATTCGTACATTGAGCGGTTCAACAAGACCTACAGGGAAG
AGGTCCTAGACTTCTACTTTTTCAAATCACTCACGGAAGTGAAGGAAATTACGGAGAATTGGCAGAGGCAGTACAACGAG
GAGCGGCCCCATGAGTCTCTTGGCGATTTGACCCCGGCAGAGTTCCTCATGAAATATTCACCCAAGGAAGTCTCTACTTT
TGGATGGCACTAA

Protein sequence :
MHSEHGISERQACAALGLSRTVYRYEPKPKDDSPIIEALLGLVDRYPRYGFGKLFAVLRRHGFRWNHKRVYRVYCLLKMN
LRRKGKKRLPSRNPQPLAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLGIEVDTNLPAARILRVLDRIVAWR
GLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPGKPTQNSYIERFNKTYREEVLDFYFFKSLTEVKEITENWQRQYNE
ERPHESLGDLTPAEFLMKYSPKEVSTFGWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 6e-85 63
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-49 42
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-36 42