Gene Information

Name : Dbac_1056 (Dbac_1056)
Accession : YP_003157585.1
Strain : Desulfomicrobium baculatum DSM 4028
Genome accession: NC_013173
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1159584 - 1160306 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase AAA; KEGG: ote:Oter_2206 ABC transporter related

DNA sequence :
ATGACCACGCCGCAACCCTCCCCCCTCCTCTGCGCCCAAGACCTGACCAAGGTCTATCATTCCGGCGCGGCCGTCGAAGT
GCGGGCCCTGGCCGGGGTCAGCCTGGACCTTTTTCCGGGCGAACTGGTTGTGCTCCTGGGCGCGTCGGGCAGCGGCAAGT
CGACCCTGCTCAATATCCTGGGCGGCCTCGACACCCCCACCAGCGGCACTCTGTCCTACCGTGGCCGGGACCTGACCCAC
GCCGACGAGAAAACCCTGACCGCCTACCGCCGCGAGTCCGTCGGCTTCATCTTCCAGTTCTACAACCTCATCCCCAGCCT
CACGGCCCGCGAGAATGTGGCGCTCATCACCGACATCGCGGACAATCCCATGGACCCGGCCGAAGCCTTGTCCCTGGTGG
GCCTTGAGCCCCGGCTGGACCATTTCCCGTCCCAGCTCTCGGGCGGCGAGCAGCAGCGCGTGGCCATCGCCCGCGCCATC
GCCAAGAACCCCGACGTGCTGCTCTGCGACGAGCCCACCGGCGCCCTGGATGTGCGCACCGGCATCACGGTGCTCACGGC
CATCGAGCGCATCAACGAGGATCTTGGCACCCTGGCCGTGGTCATCACGCACAACGTGGCCATCGCGGACATGGCCGACC
GCGTCATCCTGCTCTCTGACGGCCGCATCACCGACATCCGGACCAACGGGACCCGCCGCCGGGCGGAAGAGCTGGTCTGG
TGA

Protein sequence :
MTTPQPSPLLCAQDLTKVYHSGAAVEVRALAGVSLDLFPGELVVLLGASGSGKSTLLNILGGLDTPTSGTLSYRGRDLTH
ADEKTLTAYRRESVGFIFQFYNLIPSLTARENVALITDIADNPMDPAEALSLVGLEPRLDHFPSQLSGGEQQRVAIARAI
AKNPDVLLCDEPTGALDVRTGITVLTAIERINEDLGTLAVVITHNVAIADMADRVILLSDGRITDIRTNGTRRRAEELVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dbac_1056 YP_003157585.1 ABC transporter NC_012469.1.7685735. Protein 2e-48 50
Dbac_1056 YP_003157585.1 ABC transporter NC_008702.1.4606598. Protein 4e-28 45
Dbac_1056 YP_003157585.1 ABC transporter CP001581.1.gene798.p Protein 9e-34 44
Dbac_1056 YP_003157585.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 42