Gene Information

Name : Bfae_31330 (Bfae_31330)
Accession : YP_003156483.1
Strain : Brachybacterium faecium DSM 4810
Genome accession: NC_013172
Putative virulence/resistance : Virulence
Product : ABC-type metal ion transporter periplasmic component/surface adhesin
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3542254 - 3543171 bp
Length : 918 bp
Strand : -
Note : PFAM: Periplasmic solute binding protein family

DNA sequence : 
ATGCGTACACGCTGGTGGAGGATGCTCGGCGCCGCTGTCGTCGGGGCGCTCGTGCTCGCGGGGTGCGGGATCGCCTCCAG
CGGGGCCGAGAAGGACAGGCCCCTGGTGCTGACCACCTTCACGGTGCTCGCGGACATCGCGCAGAACGTGGCCGGGGACC
ACCTCGAGGTCGCCTCCCTCACCAAGGCCGGGGCCGAGATCCACGGCTACGAACCCACCCCGCGCGACATCGCCGCCGCC
TCCGAGGCGGATCTCGTGCTCGACAACGGCCTGGGGCTCGAGGCGTGGTTCGCCCAGTTCGTCGACTCCGTGGACGTGCC
CCGTGTGGTGGTCTCCGAGGGGGTCGAGGTCATGGACATCACCGGCGACGTCGACGCCGGCAAGCCGAACCCGCACGCCT
GGATGAGCCCGCTGAACGTGCAGGTCTACGTCGAGAACATGGTCGAGGCGTTCTCCCAGCTGGATCCCGAGCACGCCGAG
GACTACGCCGCCCAGGGCGCGGAGTACACCGCGCAGCTGCAGGAGGTCCACGACGACCTCGTCGCCGAGCTCGAGACCGT
GCCCGAGGAGCAGCGCTCGCTGGTGACCTGCGAGGGCGCCTTCTCCTACCTCGCGCGGGACGTGGGCCTGAGCGAGCAGT
ACATCTGGCCCGTCAACGCCGAGCAGCAGGCCACCCCGCAGCAGATCGCCGCGGTGATCGACCACGTCGACGCCCAGGAC
GTCCCGGCCGTGTTCTGCGAGTCCACCGTCTCGGACGCGCCGATGCAGCAGGTGGTCGAGGCGACCGACGCGCAGTTCGG
CGGCACCCTCTACGTCGACTCGCTCTCGGCGCCGGACGGCCCGGTGCCCACCTACCTCGACCTGCTGCACCACGACGCCG
ACACCATCGTCGAGGCGCTGACGGGAGGCGCGGCATGA

Protein sequence : 
MRTRWWRMLGAAVVGALVLAGCGIASSGAEKDRPLVLTTFTVLADIAQNVAGDHLEVASLTKAGAEIHGYEPTPRDIAAA
SEADLVLDNGLGLEAWFAQFVDSVDVPRVVVSEGVEVMDITGDVDAGKPNPHAWMSPLNVQVYVENMVEAFSQLDPEHAE
DYAAQGAEYTAQLQEVHDDLVAELETVPEEQRSLVTCEGAFSYLARDVGLSEQYIWPVNAEQQATPQQIAAVIDHVDAQD
VPAVFCESTVSDAPMQQVVEATDAQFGGTLYVDSLSAPDGPVPTYLDLLHHDADTIVEALTGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-66 55
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-66 55
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-66 55
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-66 55
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-66 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bfae_31330 YP_003156483.1 ABC-type metal ion transporter periplasmic component/surface adhesin BAC0349 Protein 2e-66 55
Bfae_31330 YP_003156483.1 ABC-type metal ion transporter periplasmic component/surface adhesin BAC0439 Protein 3e-58 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bfae_31330 YP_003156483.1 ABC-type metal ion transporter periplasmic component/surface adhesin VFG0525 Protein 2e-66 55