Gene Information

Name : Bfae_26540 (Bfae_26540)
Accession : YP_003156017.1
Strain : Brachybacterium faecium DSM 4810
Genome accession: NC_013172
Putative virulence/resistance : Virulence
Product : ABC-type Fe3+-siderophore transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2962439 - 2963434 bp
Length : 996 bp
Strand : -
Note : PFAM: FecCD transport family

DNA sequence :
GTGAGACGGTCCACCCCTGTCGCGCTCGCCGGCGGCCTGCTCGCGCTGGCGCTCGCCTGCGCGCTCTCCCTCATGATCGG
CGCCCGCACCGTCGCCCCGGGCACGGTGCTGGAGGCGCTGCGCCACCACGACGCCGCCCTCGCCGACCACGTGGTGATCC
ACTCCCGGCTGCTGCGCACGGCGGCCGGGGTCGCCGTCGGCGCGGCGCTCGCCGTGGCGGGGGCCGCGATGCAGGGGATG
ACCCGCAACCCGCTCGCCGATCCGGGGATCCTCGGGATCAACGCCGGGGCCACCACCGCGGTGGTCATCGGCGTGTACCT
CGCGGACGTCTCCCGGGTGGTGGAGTTCATGGCGCTCGCCCTGCTCGGAGCGGCGCTGGGCACTCTCGCCGTCTACTCGA
TCGCCTCCCGGGGACGGGACGGCGCCACCCCCGTCAAGCTCGCCCTCGCCGGCGCCGCGCTCACCGCCGGGCTCGGCTCC
GTGGTCAACGGCCTGGTGATGGTCGACGACTCCTCCCTGGACCGGCTGCGGTTCTGGCAGGTGGGCACCCTCGGCGCCCG
CAGCCTCCCCGACATCGCCGCCGTCGGCGCCCTCATGGTGCTCGGCGCGCTCGCGATCCTGGTGTGCACCGGGGTGCTCA
ACGCCCTCGCCCTCGGCGATGACGCCGCGGTGGGGCTCGGCGTGCCGGTGGCCCGCACCCGGGTGCTGCTGGGCATCGCG
ATCATCCTGCTGTGCGGGGCCGCGGTCGCGCTCGCCGGGCCGATCGGGTTCCTCGGCCTGGTGGTCCCGCACGCCGCCCG
CCTGCTCGTCGGCGGCGACTACCGCCGCATCGTGCCGCTGTGCCTGCTGGGCGGGCCCGTGCTGCTCCTGCTCGCCGACA
CCCTCGGCCGCGTGATCGCCCCGCCCGCCGAGGTGCAGGTGGGCGTGATGACCGCGCTCGTCGGCGTGCCCGTGTTCATC
GTCCTCCTCCGCACCCGCCGGCAGGTGGGACTGTGA

Protein sequence :
MRRSTPVALAGGLLALALACALSLMIGARTVAPGTVLEALRHHDAALADHVVIHSRLLRTAAGVAVGAALAVAGAAMQGM
TRNPLADPGILGINAGATTAVVIGVYLADVSRVVEFMALALLGAALGTLAVYSIASRGRDGATPVKLALAGAALTAGLGS
VVNGLVMVDDSSLDRLRFWQVGTLGARSLPDIAAVGALMVLGALAILVCTGVLNALALGDDAAVGLGVPVARTRVLLGIA
IILLCGAAVALAGPIGFLGLVVPHAARLLVGGDYRRIVPLCLLGGPVLLLLADTLGRVIAPPAEVQVGVMTALVGVPVFI
VLLRTRRQVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-20 44
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-20 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-13 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-13 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-13 43
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bfae_26540 YP_003156017.1 ABC-type Fe3+-siderophore transporter permease VFG0926 Protein 2e-18 45