Gene Information

Name : Apre_0243 (Apre_0243)
Accession : YP_003152016.1
Strain : Anaerococcus prevotii DSM 20548
Genome accession: NC_013171
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 276172 - 277782 bp
Length : 1611 bp
Strand : +
Note : PFAM: alpha amylase catalytic region; Beta- galactosidase domain protein; SMART: alpha amylase catalytic sub domain; KEGG: vvy:VVA0760 glycosidase

DNA sequence :
ATGAAAAAACATTGGTGGCATAAGGCGACTATTTATCAGATTTATCCAAGGTCTTTTATGGACTCAAACAATGATGGAAT
AGGAGATCTTAGAGGAATTATTTCTAAGCTCGATTATCTGGAAAAGCTCGGGATCAATGCGATTTGGCTTTCTCCAGTTT
ACCAGAGTCCAATGGATGATAATGGCTATGATATATCTGATTATAGGGCTATTGCAGATATTTTTGGCAATATGGATGAT
ATGGAGGAGCTCCTAGATGAAGCTAAGAAGAGAGATATTAGAATCATCATGGATCTTGTTGTAAACCATACCTCAGATGA
GCATGCTTGGTTTATAGAGGCGAGAGATAATCAAGCTAGCCCTAAGCGTGACTATTATATCTGGAGGAAGGAGAAAAACG
GCCTAGAATCTACCTTCTCTGGCTCTGCTTGGGAGTATGATGAGGATTCTGGCGAATATTATCTCCACTTATTCAGCAAG
AAGCAACCAGACCTTAACTGGGAGAATGAAGACTTGCGTCATGAAATTTACGACATGATGAACTTCTGGATTGATAAGGG
AATCGGGGGCTTCCGTATGGATGTAATAGACCTACTAGGCAAAGTTCCTGATAAAGAAATCAAGGAAAATGGACCAATGC
TTCATACCTACCTTAAAGAGATGAACAAAAATACCTTTGGTAAGCATGATTTATTGACAGTTGGTGAGACTTGGGGAGCA
AGTCCTGAAATTGCCAAGAAATATTCAAATCCAGATAACGAAGAGCTTTCCATGGTATTTCAATTTGAGCATATTGGCCT
CCAACACAAGGAGGGTATGGCTAAATGGTTCTATGAAAAGGACCTTGATGTAAGCAAGCTTAAGGAAATTTTCGCCAAAT
GGCAAACTGAACTAGAGCTTGGCAAGGGTTGGAACTCGCTATTTTGGGAAAACCACGACCTTCCTAGAGTCCTTTCACTC
TGGGCAGATGTCGACGAATATAGGGAAAAATCAGCCAAGGCTCTCGCCATTCTCCTTCATCTTATGAGAGGAACTCCTTA
TATCTATCAGGGAGAAGAAATCGGCATGACCAATTATCCTTTCAAGGACTTAGCAGAATTTGAAGATATTGAGTCAATAA
ATTATGCCAAGGAATGTCTAGAAAAGGGAGAAGACGAGGAAGAGATCCTAGATAGGATATCTGTTATAGGTCGTGACAAC
GCTAGGACTCCTATGCAATGGGACGACTCCAAGAATTCGGGCTTTTCTAAGGCGGATAAAACCTGGCTTCCTGTAAATCC
AAATTACAAAGAAATAAATGTAGAAGAAGCTCTAAAAGATCCTGATTCAATATTTTACACCTACCAAAAACTAGTTGACC
TAAGGAAAAAGAAGGATTGGCTAGTAGACGCTGACTTTAAGCTTTTAGAAACAGATGAGAAAGTCTTCGCCTACACAAGA
GAGACTGACTTAGAAAAATATCTCATTGTGGTTAATTTTTCTGGGGAAAGCCAAGACTTTGACTTAGAAGAAGATTATAC
TGATATTGTAATTTCTAATACAGATGTCAAAGAAGTTAAGAATTCAGGCAAGCTTAAGGCCTGGGACGCGTTTTGTGTGA
AAATTAAATAA

Protein sequence :
MKKHWWHKATIYQIYPRSFMDSNNDGIGDLRGIISKLDYLEKLGINAIWLSPVYQSPMDDNGYDISDYRAIADIFGNMDD
MEELLDEAKKRDIRIIMDLVVNHTSDEHAWFIEARDNQASPKRDYYIWRKEKNGLESTFSGSAWEYDEDSGEYYLHLFSK
KQPDLNWENEDLRHEIYDMMNFWIDKGIGGFRMDVIDLLGKVPDKEIKENGPMLHTYLKEMNKNTFGKHDLLTVGETWGA
SPEIAKKYSNPDNEELSMVFQFEHIGLQHKEGMAKWFYEKDLDVSKLKEIFAKWQTELELGKGWNSLFWENHDLPRVLSL
WADVDEYREKSAKALAILLHLMRGTPYIYQGEEIGMTNYPFKDLAEFEDIESINYAKECLEKGEDEEEILDRISVIGRDN
ARTPMQWDDSKNSGFSKADKTWLPVNPNYKEINVEEALKDPDSIFYTYQKLVDLRKKKDWLVDADFKLLETDEKVFAYTR
ETDLEKYLIVVNFSGESQDFDLEEDYTDIVISNTDVKEVKNSGKLKAWDAFCVKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 9e-123 52