|
Name : Apre_1272 (Apre_1272) Accession : YP_003153016.1 Strain : Anaerococcus prevotii DSM 20548 Genome accession: NC_013171 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1364464 - 1366434 bp Length : 1971 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: gme:Gmet_1338 polysaccharide biosynthesis protein CapD DNA sequence : ATGAAGAATTCGAAAATAATTGACAAGAAAAAACTAATACTAGGATTTTTTGATATATTAATTATCAATTTAGCTTATTT TCTAGCCCTGTATTTCAGATTTGATATGAATTTCAGGGCCATACCTTTGGATTTCCTTGATGCTTTCAAGACCTATGCTA TTTTTAATACCATCCTTACGATAGCTATTTACGGTCTACACAAGATGTATAACATGATACTGGAGTATGCTTCCTACAAG GAGCTTATTAATATCACTCAAGCTGTTATTCTATCTCTTATAAGTCACGCTGTATTAATGACAATTTTTGTCTATAGAAT GCCAATATCATACTATATATTCGGATTTATGATTCAATATGTTTTGACTGTGGCATCAAGATTTATCAAGAAGATGATGA TTCACAAAAGCTACAAGACTGACAAGAAGAACCAGTCTTACAAGAGAGCCCTAATCGTTGGGGCAGGATCTGCAGGACAG ACTCTAAAAAGAGATATATCTAATTCCAACAATGGTGGCAAGACTAATATTCTTGTTGTTGGCTTCATAGATGATGATCC AAAGAAGAAAAATCAATACATAGATAATAGTAGAATCTTCGGTGGAAGGGATATGATAAAGGAAATTGTCGAGGAAGAAG CCATCGATGTTATTCTTGTAGCTATTCCTTCTGTAGAGGAAGTCGAGAAGAGAGAAATCCTAAGAATATGTAACGAAACA GGATGCGAGGTCAAAGTTCTTCCTGGTATTTACCAACTTGTTTCAGGAAAAGTTACCATGTCTACTATGAAGGATATCCA AATCGAAGACCTTTTAGGACGTGATCCGGTAAAGATTTTCTCCAACGAAACTTTCGATTACCTCAATGACAAGGTAGTCC TAGTTACAGGAGGGGGAGGATCCATAGGATCTGAACTTTGTAGGCAAATAGCTCAATATGGTCCAAGACTACTTATAATA TTCGATATATACGAGAACAATGCCTATGAAATAGAGCAAGAACTTAAGAGAAACAACAAGGACCTCAACTTTATAACCCT AATAGGCTCTGTAAGAGACTACAAGAGAGTGGAGAAGGTATTTAAGACCTATAAACCAGACATAGTATTTCACGCAGCAG CCCACAAGCACGTACCGTTGATGGAAGTAAGTCCAGTGGAAGCTATCAAGAACAATGTCAGAGGAACATACAATGTCGCC CTACTTTCCCTAATCTATGACGTTCAAAGATTTGTTCTCATATCAACAGACAAGGCAGTCAACCCAACATCAGTTATGGG AGCAACCAAGAGAGTTTGTGAGAAGATAATCCAAGGAATAAATGACATAAGAGATAGCAAAGAATATAATAATCTTGCAA AGGTAATTGTCCAAGATGGGGACAGAAATATTACAATTAATCCTGAAGACTTGCTAGAAGGGAAAAATCCAGGAACCGAA TTTGTTGCAGTTCGTTTTGGTAATGTATTGGGATCGAATGGTTCTGTAATACCACTATTTAAAAAGCAAATCGCAGCGGG TGGACCTGTTACAGTTACCCACCCAGAGATAATCAGATACTTTATGACAATTAAGGAAGCTGTAAAGTTAGTCCTTCAAG CTGGATCCATGGCCCAAGGCGGTGAAATATTCGTCCTAGATATGGGAGAACCAGTCAAGATTGACGACCTGGCAAGACAG CTAATAAGACTATCAGGTTATCAACCAGACATAGATATGCCTGTAGTCTATACGGGACTTAGACCTGGAGAGAAGCTCTA CGAGGAAAGACTGATGGACGAGGAAGCCCTCACAGATACCCACATTGAGGGAATATCTGTAGGCCGACCACTAGACTTCT CTAGGGGAGAATTTTTCGGGAAACTTGATAAAGTAATCAATCAAGAAAATATTGATGAACTTGATATCATAGCAACGATT AATGAGTTAATTACTACATTTATAGGAAAGGATAATTCGAAGGGAGAATAG Protein sequence : MKNSKIIDKKKLILGFFDILIINLAYFLALYFRFDMNFRAIPLDFLDAFKTYAIFNTILTIAIYGLHKMYNMILEYASYK ELINITQAVILSLISHAVLMTIFVYRMPISYYIFGFMIQYVLTVASRFIKKMMIHKSYKTDKKNQSYKRALIVGAGSAGQ TLKRDISNSNNGGKTNILVVGFIDDDPKKKNQYIDNSRIFGGRDMIKEIVEEEAIDVILVAIPSVEEVEKREILRICNET GCEVKVLPGIYQLVSGKVTMSTMKDIQIEDLLGRDPVKIFSNETFDYLNDKVVLVTGGGGSIGSELCRQIAQYGPRLLII FDIYENNAYEIEQELKRNNKDLNFITLIGSVRDYKRVEKVFKTYKPDIVFHAAAHKHVPLMEVSPVEAIKNNVRGTYNVA LLSLIYDVQRFVLISTDKAVNPTSVMGATKRVCEKIIQGINDIRDSKEYNNLAKVIVQDGDRNITINPEDLLEGKNPGTE FVAVRFGNVLGSNGSVIPLFKKQIAAGGPVTVTHPEIIRYFMTIKEAVKLVLQAGSMAQGGEIFVLDMGEPVKIDDLARQ LIRLSGYQPDIDMPVVYTGLRPGEKLYEERLMDEEALTDTHIEGISVGRPLDFSRGEFFGKLDKVINQENIDELDIIATI NELITTFIGKDNSKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-85 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Apre_1272 | YP_003153016.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 3e-87 | 42 |
