Gene Information

Name : Apre_1256 (Apre_1256)
Accession : YP_003153001.1
Strain : Anaerococcus prevotii DSM 20548
Genome accession: NC_013171
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1348646 - 1350121 bp
Length : 1476 bp
Strand : +
Note : KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; helix-turn-helix domain prot

DNA sequence :
ATGAAAAAATTATCTATAGAGAAATTGGCAGATACTGTCATTAACAAGAGAAAAGAAAAAGGAATAACTCAAAAAAGTCT
TGCTGATACTACTGGTATCAACAGGGCTATGATCAGTCGTTTGGAATCATGCGACTACACACCTTCTATCGACCAGCTAC
AAGCTATAGGAGAAGTCTTGGACTTTGAAGTAGTTGATATGTTTGAGGAAGAAACTTACGAAAAAGAAATTAAATCAGAC
AAAAAATACAAGATAGCTGTTGCAGGAACTGGATATGTAGGTATGTCCATTGCGACCCTCCTATCCCAACATAATGAGGT
TACTGCAGTTGATATTGTAGAAGAAAAGGTAGAGAAGATTAATAATAAGATCTCTCCTATCCAGGATGATTATATAGAAA
AATATCTCGAAGAAAAGGACCTAAATTTAAGAGCAACCATAGATGGAGAGGCTGCCTACAAGGATGCTGACTTTGTAGTA
ATCGCAGCTCCTACCAACTACGATAGCAAGAAGAACTTTTTCGATTGCTCTGCTGTAGAAGATGTAATCGAGCTTGTCCT
TAAGGTCAATCCAGAAGCTACTATGATTATCAAATCCACTATCCCAGTTGGTTACACTAGAGAAATTAGGGAAAGATATG
AGACAGATAAGATTATCTTTAGCCCAGAATTCCTTCGTGAATCCAAGGCTCTTTACGACAATCTCTACCCTTCAAGAATC
ATTGTATCATGCGATGATCAAAGTAGGGATAAGGCAGAAATATTTGCAAATCTCCTTAAAGAAGGCGCCATCAAAAAGGA
CATCCCTACCCTCTTTATGGGTTTTACAGAGGCAGAAGCAGTCAAGCTTTTCGCAAACACCTACCTCGCCCTTCGTGTAT
CCTACTTCAACGAACTTGATACCTACGCAGAAAGCAAGGGACTAAATACAGAAGAGATCATCAACGGAGTATGCCTAGAT
CCAAGAATAGGCACCCACTACAACAACCCTTCCTTTGGCTATGGTGGATACTGCCTGCCAAAAGATACCAAACAACTTCT
AGCAAACTTCGACAAGGTCCCACAAAACATGATCTCCGCAATCGTAGACTCCAATAGGACCAGAAAGGACTTCATAGCAG
ATCAAGTCCTAAACATAGCAGGCTACTACGATTACAATTCAGACGACCAGTATCAACCAGAAATGGAAAAAGACTGTGTA
ATAGGAGTCTACAGACTCACCATGAAGTCAAACTCAGACAACTTCCGCCAATCCTCTATCCAAGGAGTTATGAAAAGAAT
CAAGGCCAAGGGAGCAAAGGTAATAATCTACGAACCAACCCTAGAAGACGGTGACACCTTCTTTGGATCTTTAGTAGTAA
ACAACCTAAACAAATTCAAAAAAATGAGCCAGGCAATAATAGCCAACAGGTACGACGAGAGCCTAGACGATGTGATGGAG
AAGGTATACACGAGGGATATATTTAAGAGAGACTAG

Protein sequence :
MKKLSIEKLADTVINKRKEKGITQKSLADTTGINRAMISRLESCDYTPSIDQLQAIGEVLDFEVVDMFEEETYEKEIKSD
KKYKIAVAGTGYVGMSIATLLSQHNEVTAVDIVEEKVEKINNKISPIQDDYIEKYLEEKDLNLRATIDGEAAYKDADFVV
IAAPTNYDSKKNFFDCSAVEDVIELVLKVNPEATMIIKSTIPVGYTREIRERYETDKIIFSPEFLRESKALYDNLYPSRI
IVSCDDQSRDKAEIFANLLKEGAIKKDIPTLFMGFTEAEAVKLFANTYLALRVSYFNELDTYAESKGLNTEEIINGVCLD
PRIGTHYNNPSFGYGGYCLPKDTKQLLANFDKVPQNMISAIVDSNRTRKDFIADQVLNIAGYYDYNSDDQYQPEMEKDCV
IGVYRLTMKSNSDNFRQSSIQGVMKRIKAKGAKVIIYEPTLEDGDTFFGSLVVNNLNKFKKMSQAIIANRYDESLDDVME
KVYTRDIFKRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 6e-84 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Apre_1256 YP_003153001.1 XRE family transcriptional regulator VFG0963 Protein 6e-115 61