Gene Information

Name : Apre_1244 (Apre_1244)
Accession : YP_003152989.1
Strain : Anaerococcus prevotii DSM 20548
Genome accession: NC_013171
Putative virulence/resistance : Virulence
Product : Aldehyde Dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1329643 - 1331115 bp
Length : 1473 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: cco:CCC13826_1326 elongation factor P (EF-P)

DNA sequence :
ATGAAAATTCAAGATAGATATGATTTATATATTAATGGTGAATGGATTAAGCCAGCATCAGGCGAGTATCTCGATGCAAT
AAATCCTGCTACAGGCGAGAAGATTGCTGAGTTTGCTACTGCAAATAATGAGGATGTAGACAGAGCGATCGAGGCTGCTA
GAGCATGTTTTGATGGAGAATACGGATCTTTCTCTAAGGAAGAACGTGCAAACCTCCTATTTAAAATAGCCGATAGGATA
GAAGAAAACTTAGAAGATCTTGCCACAATCGAGACTATGGATAATGGTAAGGCAATTCGTGAAACAAGGACAGTTGACCT
TCCTTGGGTTGTAGATCATTTTAGATATTTCGCTTCCCTCTTAAGAGCTGATGAAGATGAAATTTCTAAGCTTGATGGTA
GATTTGTATCAATCAGAAAAAGAGAGCCACTTGGGGTTGTAGCTCAAATGATTCCTTGGAACTTCCCACTCCTTATGGCT
GCTTGGAAGCTTGCACCAGCTATAGCAGGGGGAAATACTATAGTAATCTCCCCTTCTTCAAACACATCTATAGGGCTTCT
TGAGATGATCAGAAGAATAGAAGACCTCCTTCCAAAGGGACTTATCAATGTTGTAAGTGGTAGGGGTTCTGTAACTGGAG
AATACCTCCAACATCACAAAGGCGTGGATAAGCTTGCCTTTACAGGTTCTACAAGTGTTGGTCGTCACATTGGTATTTCT
GCAGCAGAAAACTTAATTCCTTCAACCTTAGAGCTTGGTGGTAAGTCAGCTCATATCATTTTTGACGATGCTGATATAGA
AAAAGCCCTAGAAGGCGCCCAAGTTGGAATCCTATTCAATCAAGGAGAAGTTTGCTCAGCAGGATCTAGGCTCTTTATCC
AAGAAGGAATCTACGATGAATTTGTAGAAAAACTTGTTGAAGCTTTCAATAAGGTAAAAGTCGGTAACCCTCTAGAAGAG
GACACACAAATGGGTGCCCTAAGAGATGAGAAGAGAATCCCAGTTATAGAAGAATTCATCAAAAAAGCAACAGATGCAGG
TGCAAAGGTCCTTGCTGGTGGTAAGAGACTTACAGAAAACGGACTCGACAAGGGAGCCTTCTTCGCACCAACTATGCTTG
CTGATGTTCCAGAAGATAACGACGCCTACAGAGAAGAAATCTTTGGACCAGTTGTAGTAATAAAGAAATTCAAGGACGAG
GACGATGTTATAAGAATGGCAAATGACTCCCACTACGGCCTTGGTGGAGGAATCTACTCCAACGACCTATATAGGATAAT
GGATGTTTCAAATAGACTAAAGACAGGAAGAATTTGGGTTAACACCTACAACCAATTCCCAGCAGGTGCATCATTCGGTG
GCTACAAGGATTCTGGTATAGGTAGGGAAACAGACAAACTTGCCCTTGAAGCCTACACTCAAGTTAAAAATATTATCATT
GATTCCTCAAAAGAAAAATTAGGTTTCTATTAA

Protein sequence :
MKIQDRYDLYINGEWIKPASGEYLDAINPATGEKIAEFATANNEDVDRAIEAARACFDGEYGSFSKEERANLLFKIADRI
EENLEDLATIETMDNGKAIRETRTVDLPWVVDHFRYFASLLRADEDEISKLDGRFVSIRKREPLGVVAQMIPWNFPLLMA
AWKLAPAIAGGNTIVISPSSNTSIGLLEMIRRIEDLLPKGLINVVSGRGSVTGEYLQHHKGVDKLAFTGSTSVGRHIGIS
AAENLIPSTLELGGKSAHIIFDDADIEKALEGAQVGILFNQGEVCSAGSRLFIQEGIYDEFVEKLVEAFNKVKVGNPLEE
DTQMGALRDEKRIPVIEEFIKKATDAGAKVLAGGKRLTENGLDKGAFFAPTMLADVPEDNDAYREEIFGPVVVIKKFKDE
DDVIRMANDSHYGLGGGIYSNDLYRIMDVSNRLKTGRIWVNTYNQFPAGASFGGYKDSGIGRETDKLALEAYTQVKNIII
DSSKEKLGFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-100 46
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-105 46
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-105 46
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-105 46
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-105 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Apre_1244 YP_003152989.1 Aldehyde Dehydrogenase VFG0082 Protein 6e-101 46