Gene Information

Name : Ccur_00690 (Ccur_00690)
Accession : YP_003150484.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 84276 - 86891 bp
Length : 2616 bp
Strand : +
Note : PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGAGACTTGATAAATTAGCGATCACCGCACAGGAGGCCCTGCAGGTGGCTATGGGTATCGCGGGGGAACATGACAATCC
CACCGTTGAGCCGATTCACCTGCTAGCTGCGCTGATCGATTCAAACGAAAATAACCTAGAGGCCATTATCAAACGCATTG
GGGCTGATGCAGCTCAACTGCGTACCCTTGTCTCCGATGAGGTGGAAAAGCTTCCGCACACACAGGGTTCCATGAGCGTG
CCGTCAAATGCACTGCTCCAAGTGCTTGATCGCGCGGTTAAAGCAGCAGAGAAGCTCGGCGATAGTTATGCGACGAGCGA
GCACGTACTGATTGCGCTGTCCGAAGATAAAGGCGCTGCGGGCCGTATTCTTTCAGGGCAGGGTGTTACGCGCAAGAATA
TCGAAGAAGCTTACGAAGAATTGCGCGGCGACACACGAGTGACCGAAGCCGACCAGAAGGCGGAATTTGAAGCGCTTGAA
AAGTATGGGCAGAATTTGACCCAACAGGCGCGCGAAGGCAAGCTTGATCCAGTTATCGGTCGTTCGGAAGAGATCCGTCG
CACCGTTCAAGTGCTATCGCGTCGCACGAAGAACAACCCGGTGCTTATTGGTGAGCCCGGTGTGGGTAAAACAGCTATCG
TCGAAGGACTCGCGCAGCGTATTGTTGCGGGCGATGTACCGACGAGCTTACGCGATCGCGACATTATTGCGCTTGATCTG
GGCTCCATGATGGCTGGCGCGAAGTATCGCGGCGAATTTGAAGACCGTCTCAAGGCAGTTCTGCGTGAAGTCAAAGATGC
AGAAGGGCGCATCATCCTGTTCATCGACGAATTGCATACTATTGTCGGGGCAGGGTCAACGGGCGATAGCTCGCTTGACG
CCGGCAATATGCTCAAGCCGGCTTTAGCGCGTGGTGAACTTCATGCGATTGGCGCAACGACACTCGACGAGTATCACAAG
TACATCGAAAAGGACGCAGCGCTTGAGCGCCGTTTTCAGCCAGTAATTGTGGGCGAGCCTACAGTTGAGGACACTATTGC
CATTCTGCGTGGTCTGAAAGAAAAGTACGAGATTCACCATGGCGTTCGCATTACCGACAATGCACTCGTGGCAGCGGCTG
AACTTTCAAATCGCTATATATCTGATCGCTTCCTTCCTGATAAGGCTATTGACCTTATGGACGAGGCAGCGAGCCGTCTG
CGCATTGAAATTGACAGCATGCCTGAAGAGGTTGATCTTGCGAGCCGCAAGCTCACACAGATGCAGATCGAAGAGCAGGC
GCTCATGAAGGAAGGTGATGCAGCCAGCAAAGAGCGTCTTGCTGCGCTGCAGCAAGAGATTGCCTCAGCACAGGAAGATC
TGGATAAGCGCAAGGCTGAATGGAAAAACGAAAAAGACGTTATCGTTCGTGTACAAGAGCTGAAAAGCGAACTAGAAGCT
GCGCAGAGTGAAGAAGAGCGTGCCACTCGCGAGGGCGATTTATCCCGCGCTAGTGAGTTGCGCTATGCACGTATCCCTGA
GCTGAAAAATCAGCTGGCCGATGCAGAAACGGAACTCAACGCCAAACAGCAGGATGGTGCCATCCTGAAAGAAGAAGTCT
CCGAAGAAGAGATTGCTGAAGTGGTGTCTACCTGGACGGGCATCCCTGTGTCAAAGATGATGCAAGGGGAAATGGCTAAG
CTTGCCGACCTGGAAGATCGCTTGCATGAGAGGGTCGTGGGGCAGGACGAGGCTGTGTCAGCAGTGGCGGGGGCTATCCG
GCGCAATCGGGCTGGCCTTTCCGATCCTGATAGGCCTATCGGTAGCTTCTTATTCCTTGGTCCCACCGGCGTGGGCAAGA
CCGAATTGGCTAAGGCACTTGCTGAGTATCTGTTCGATACCGAGCGGGCCATGGTACGTATTGACATGTCTGAATACATG
GAAAAGTTCAGCGTGCAGCGGCTGATTGGTGCTCCTCCGGGATATGTTGGCTACGACGAAGGTGGTCAGCTCACCGAAGC
GGTTCGCCGTCGCCCTTACAGCGTGATCTTGCTTGACGAAATCGAGAAAGCACACCCGGATGTATTTAATATCCTGTTGC
AGGTGCTTGATGACGGTCGTCTTACCGATGGGCAAGGGCGTGTTGTCAGCTTCAAGAACGCCATCATTATTATGACGAGC
AATGTGGGCAGTCAGTTTATTCGCGAGTTTGCTGAAAATGGCGATGAAAAGCAGATGCGTGAAGCGATTGATGATGCGCT
GCGGCAGACATTCCGTCCGGAATTCATCAATCGTATTGATGATGTCGTGGTCTTCAATTCACTGTCGTTTAATGCGATCG
AGCCGATTGTCGATTTGCAGCTCGAAGACGTGCGGGATCGTTTAGCTCAGCGCCGTATTCAGCTGGAGGTCAAGCCAGAT
GCTATGCAGCAATTGGCACTCGACGGCTACGATCCGGTGTTTGGTGCGCGTCCATTAAAGCGCCTGATCCAAAAGGAAAT
TGTTGATCGGGTGGCAAACGAGATCGTACGCGGGCATGTGCTTGACGGATCGAAGGTTGTTATCAGCCTTGATGATGAAC
TGCACTATCACTGCACAGTGGAAGAGCCAGCAGGTCAGCCTGAGTTGGGTGTCTAA

Protein sequence :
MRLDKLAITAQEALQVAMGIAGEHDNPTVEPIHLLAALIDSNENNLEAIIKRIGADAAQLRTLVSDEVEKLPHTQGSMSV
PSNALLQVLDRAVKAAEKLGDSYATSEHVLIALSEDKGAAGRILSGQGVTRKNIEEAYEELRGDTRVTEADQKAEFEALE
KYGQNLTQQAREGKLDPVIGRSEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPTSLRDRDIIALDL
GSMMAGAKYRGEFEDRLKAVLREVKDAEGRIILFIDELHTIVGAGSTGDSSLDAGNMLKPALARGELHAIGATTLDEYHK
YIEKDAALERRFQPVIVGEPTVEDTIAILRGLKEKYEIHHGVRITDNALVAAAELSNRYISDRFLPDKAIDLMDEAASRL
RIEIDSMPEEVDLASRKLTQMQIEEQALMKEGDAASKERLAALQQEIASAQEDLDKRKAEWKNEKDVIVRVQELKSELEA
AQSEEERATREGDLSRASELRYARIPELKNQLADAETELNAKQQDGAILKEEVSEEEIAEVVSTWTGIPVSKMMQGEMAK
LADLEDRLHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEYLFDTERAMVRIDMSEYM
EKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTS
NVGSQFIREFAENGDEKQMREAIDDALRQTFRPEFINRIDDVVVFNSLSFNAIEPIVDLQLEDVRDRLAQRRIQLEVKPD
AMQQLALDGYDPVFGARPLKRLIQKEIVDRVANEIVRGHVLDGSKVVISLDDELHYHCTVEEPAGQPELGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-112 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_00690 YP_003150484.1 ATP-dependent chaperone ClpB VFG0079 Protein 6e-165 46