Gene Information

Name : Ccur_03250 (Ccur_03250)
Accession : YP_003150734.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 376264 - 376965 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATACACATCGAAGTTGAAGACCTGCATAAAAGCTACGGGGAAGGTGAAGCGCGCGTTGAAGTGCTGCGCGGGGTTAA
CTTGCAGGTTGAGCGCGGCAGTATGAATGCCATCTTAGGACCTTCAGGTTCGGGTAAATCAACACTGCTCAATGCTATTG
GGGGTCTTGAATCGGTCGATAAAGGGTCTATTCGCGTTGAGAAGCACGATATTACTACGTTGGGACCAAAGGAACTTTCT
GCGTATCGACGTGCCACAGTCGGGTTTGTCTTTCAGTTCTACAATCTGATTCCCAACCTCACGATAAGTGAAAATATCCG
CGTGTGCCAATATCTTTCGTCCGATCCGCTTGATACCGCTGAGTTGCTTTCGACATTAGGTCTTGCCGATCATGCCAATA
AGTTTCCCAGCGAGCTTTCCGGTGGCCAGCAACAGCGTTGCGCTCTCGCCCGTGCTCTGGTGAAGAACCCGTCTGTTCTG
TTATGTGATGAACCGACCGGTGCACTCGATACGCACACCGCTCGCGAAATCCTGATGTTATTGGAACTTGTTAACAAGCG
ATTCGGCACAACGATGCTGATTGTCACGCACAGCGAGGGAATCTGTGCCATGGTCGATCAGATAGTGACGATTAAAGATG
GTCTTATCGAACGTGCCGAAGCCAATGCTCACAAGATTCCCGCTGGCGACATTCAGCTTTAG

Protein sequence : 
MIHIEVEDLHKSYGEGEARVEVLRGVNLQVERGSMNAILGPSGSGKSTLLNAIGGLESVDKGSIRVEKHDITTLGPKELS
AYRRATVGFVFQFYNLIPNLTISENIRVCQYLSSDPLDTAELLSTLGLADHANKFPSELSGGQQQRCALARALVKNPSVL
LCDEPTGALDTHTAREILMLLELVNKRFGTTMLIVTHSEGICAMVDQIVTIKDGLIERAEANAHKIPAGDIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_03250 YP_003150734.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-46 43
Ccur_03250 YP_003150734.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 8e-41 42
Ccur_03250 YP_003150734.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-36 42
Ccur_03250 YP_003150734.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 5e-34 41