Gene Information

Name : Ccur_02600 (Ccur_02600)
Accession : YP_003150669.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Virulence
Product : holin, phage phi LC3 family
Function : -
COG functional category : S : Function unknown
COG ID : COG5546
EC number : -
Position : 315654 - 315905 bp
Length : 252 bp
Strand : -
Note : PFAM: Bacteriophage holin; TIGRFAM: holin, phage phi LC3 family

DNA sequence :
ATGATTAATTGGGAAATTCGCATGAAGAGCAAGACGTTCTGGCTGGGGCTTATTCCCGCCGTGTTGCTACTGGTGCAGGC
GATAGCCGTACCCTTTGGCTATACGTGGGACTTCGCCGAGTTGGGTAGCCAGCTCACGGGCATTGTCAACGCCGCCTTTG
CCTTGCTGGCAATCTTAGGTGTTGTGGTTGACCCCACGACCCCAGGTGCGGGCGACTCTGAGCGGGCGCTTAGCTATGGG
CACGAGGAATAG

Protein sequence :
MINWEIRMKSKTFWLGLIPAVLLLVQAIAVPFGYTWDFAELGSQLTGIVNAAFALLAILGVVVDPTTPGAGDSERALSYG
HEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1946 NP_372470.1 holin-like protein Not tested ¥ÕSa3 Protein 2e-12 47
SA1760 NP_375055.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-12 47
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 2e-12 47
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 2e-12 47
SAKOR_01925 YP_008492113.1 Holin Virulence ¥ÕSa3 Protein 2e-12 47
MW1887 NP_646704.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-12 47
SAOV_1911 YP_005737356.1 phage-associated holin Not tested ¥ÕSa3 Protein 7e-09 44
SEQ_2040 YP_002747255.1 phage holin Not tested ¥ÕSeq4 Protein 0.002 41