Gene Information

Name : Ccur_13620 (Ccur_13620)
Accession : YP_003151719.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1541231 - 1542724 bp
Length : 1494 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGGATCGACCAACACTACAAGAGACTTACGGACTCTATATTAACGGGGAATTTCGTCCCGCATCGGACGGTGCTACGTT
TGAAACAACTTGCCCTGCTGACAGTACCCATCTGGCATATATTGCCGCTGGCACCACTCAGGATGTTGATGACGCTGTTG
CGGGCGCATGGAAGGCGTTTGAAAGCTGGGGAAAGACTACCCCGAAACAGCGCGCTGTTATTCTGCGTCAGATCGCTGAT
GTGATTGAAGAAAACAAGGAACGGATCGCATTTATAGAGAGCCTTGATAACGGCAAACCCATTCGCGAAACACTCAATAT
TGATGTTCCGCTGGCGATCGACCACTTTCGCTATTTTGCAAGCGTGATTGAAGTTGAAGAAGGGTCGGCTACGATTCTGG
ACAATCGCTATCTGAGCTTGATTTTGCGTGAGCCTATTGGGGTTGTGGGCCAGATTGTACCTTGGAACTTTCCCTTTACT
ATGGTTGCATGGAAGCTTGCACCAGTTCTTGCAGCTGGTGACTGTACGGTGTTTAAGCCGTCGAGCATCACGTCGCTTTC
TGTGCTGGAGCTGGCACGTCTAACGCAAAGCATTATCCCTGCAGGCGTGTTCCAGGTAATTACTGGGTCGGGTCGTGCGG
CCGGACAGGCACTTTTAGATCATCCTGACTTGCGTAAGCTGGCGTTTACCGGGTCGACCGAAGTTGGCTACAGTGTGGCT
GATGCTGCGGCGAAGAAGTTGGTTCCTGCTACGCTTGAACTCGGCGGTAAGTCGGCAAATATTTTCTTTGACGACTGCGA
TTTCGAAAAGGCGATGGATGGCCTGCAACTAGGCATTCTCTTTAACCAAGGACAGGTTTGCTGCGCGGGCAGTCGCGTTT
TTGTGCAGGATACGATCTATGACCGCTTTGTCGAAGAAGCAGCAAAGCGATTCAAGGCAGTTCGCCTGGGCATGCCATGG
GATCCGGAAACTCAAATGGGTTCGCAGATCAACGAAAAACAGGCTGAAAAGATTGTCAACTACGTCAAGATTGGTGTTGA
AGAGGGGGCACGTATTGCCGTTGGAGGCGCGCGTGCTACCGAGGGCGACCTGGCAAAGGGCGCGTACGTACAGCCGACGC
TGCTGGTGGACGTAACGAATGATATGCGCGTAGCGCGTGAAGAAATCTTTGGTCCGGTGGCTGTTGTTATCAAATTCCAC
AGTGAAGACGAAGTGGTGGCTCTTGCCAACGACAGTGAATATGGCTTAGGCGGTGCAGTTTGGACTCGTGATCTCAACCG
AGCGTTTAGGGTAGCGCGTACGGTTGAAACGGGTCGCATGTGGGTGAATACATACAACCAACTGCCCGAAAAGGCTCCAT
TCGGTGGCTATAAGAAGTCGGGTATCGGTCGCGAGACGCACAAAGATATTCTGAATGCATACACCCAGGTGAAGAATATC
TTTATCGATCTTGAAGACGCCCCGAGCGGTTTTTATCCCGTATCGGAAGGTTAG

Protein sequence :
MDRPTLQETYGLYINGEFRPASDGATFETTCPADSTHLAYIAAGTTQDVDDAVAGAWKAFESWGKTTPKQRAVILRQIAD
VIEENKERIAFIESLDNGKPIRETLNIDVPLAIDHFRYFASVIEVEEGSATILDNRYLSLILREPIGVVGQIVPWNFPFT
MVAWKLAPVLAAGDCTVFKPSSITSLSVLELARLTQSIIPAGVFQVITGSGRAAGQALLDHPDLRKLAFTGSTEVGYSVA
DAAAKKLVPATLELGGKSANIFFDDCDFEKAMDGLQLGILFNQGQVCCAGSRVFVQDTIYDRFVEEAAKRFKAVRLGMPW
DPETQMGSQINEKQAEKIVNYVKIGVEEGARIAVGGARATEGDLAKGAYVQPTLLVDVTNDMRVAREEIFGPVAVVIKFH
SEDEVVALANDSEYGLGGAVWTRDLNRAFRVARTVETGRMWVNTYNQLPEKAPFGGYKKSGIGRETHKDILNAYTQVKNI
FIDLEDAPSGFYPVSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-102 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-105 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-105 48
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-105 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-104 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-79 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_13620 YP_003151719.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 8e-103 48