Gene Information

Name : Ccur_13220 (Ccur_13220)
Accession : YP_003151682.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Virulence
Product : ATPase with chaperone activity, ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1486327 - 1488915 bp
Length : 2589 bp
Strand : -
Note : PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)

DNA sequence :
ATGTCATTTGATAAATTTACCGACAAGGCGCGCAAGGTGCTTGTAATCGCCCAAGACGAAGCTCGCACTCTGCATCAGCC
CTATGTTGGTACCGAACATATACTTCTTGCGCTTATTAAGGAAAAAGATGGCCTTGCCGCACAAGCGCTTGATCGCTTGA
ATGTTACATACGATGAGACTGTTCAGACAATTCGGCAAGTAGTTGCTATCGATCCTGATACCGATGTGTCGGGACATTTG
GGCTTCACATCGAGGGTTAAGCGGGTGCTAGAAAACAGCCTGCGTGAAGCTATGCAGATGGGACAGAGCTACATTTCTAC
CGAGCATCTTTTGCTGGGCATTATTCGCGAGGGCGAAGGTGTGGCTATCGACGTACTTGCTCGCATGGGCGTTACGGGTG
ATGCCGTACGCGGAGCCTTAAACGATCTCGTCGGACAATCGGCGGTGTTTGCTGGTCGGATTAACCCTGATGTACAGAGC
ACTCCTTCCGAAAGTGCCCTGAAAGAATATGGCACCGACCTTACCAAGAAAGCGTTCGACGGAAAGCTCGATCCGGTTAT
TGGCCGCGCGGGTGAAATCGAACGTATTATGCAGATACTCTGCCGCCGTCAGAAAAATAATCCCCTGCTCATTGGCGAAC
CGGGCGTTGGGAAGACGGCTGTGGTGGAGGGTTTGGCACAATTGATTGTTTCAAATCAGGTGCCTGATATCTTGCGCAAT
CGCCGCCTGTTCACGCTTGATATTTCAAGTTTGGTAGCCGGCAGTAAGTACCGCGGTGAATTCGAAGAGCGCTTGAAAAA
ATGCATTCGTGAAGTGGTCAATGCGGGCGATATTATTCTGTTTATCGACGAATTGCATACGCTTATTGGTGCTGGCGCCG
CCGAAGGCTCTATCGACGCAGCGAGCATTTTAAAGCCGCCTCTGTCTCGTGGTGAAATCCAAGTGATTGGCGCGACAACG
ATCGACGAGTATCGCAAACATATCGAAAAAGATTCAGCTCTCGAGCGGCGCTTCCAGCCTATTACGGTGGGCGAACCCAA
CGAAGAGCAATCGGTGCGCATTATGCAGGGTCTGCGCGATCGCTACGAAGAACACCATCAGGTGCACTTCAGCGATGAAG
CGCTGCAGGCGGCTGTCACGCTTTCAAACCGCTATATTCAGGATCGCTTTTTGCCTGATAAAGCTATCGACGTGCTTGAT
GAAGCGGGTGCGCGCATGCGCATTCGCAACATGACGCTTCCGCCCGAGTTGCGCGACATCGACGAAGAACTGCGCGAGAT
GCGCATGAAGAAAGAGGCGGCTATCGCCAATCAAGACTTCGAAGAGGCTGCTACATTGCGCGATCAAGAAGATCAATTGC
GTGATAAGCGTGCCGAGGCGCAGAAGAGCTGGGAAGAGTCGTCGCGCAAAGACGTGCAGAACGTGTCGGCAGAGGATATT
GCCGATGTGGTGAGCATGACGACCGGCGTGCCGGTGTCTGATCTAACCGAAGCCGAAGCCGATAAGCTTCTGCGTATGGA
AAGTGTCTTGCACGAGCGTATTATTGGTCAGGATGAAGCTGTTACGGCCGTATCGAAGGCGATTCGTCGAGCACGTAGTG
GCTTAGCCGATCCGAAACGTCCCACCGGTTCGTTTATCTTCCTTGGTCCGTCGGGCGTCGGTAAGACCGAACTGTCAAAG
GCACTTGCTGAATTCCTCTTTAACAGCGAAGATGCACTCGTGAGCTTTGACATGAGTGAATACATGGAAAAGCATACGGT
TTCTCGTTTGATCGGCAGCCCTCCGGGCTATGTCGGCTACGACGAAGGTGGTCAGCTCACAAAGGCCGTGCGTCAACGTC
CTTATTCGGTGGTGTTGTTTGATGAAATCGAAAAGGCGCACCCTGATGTCTTCAATATCTTGCTGGAGATTCTTGAAGAA
GGGCGCCTGACCGATGGACAGGGTCGCGTTGTCGATTTCCGTAACACGGTCATTATTATGACAAGCAACGTGGGTGCGCG
TGATATTGCGCAGACGCAGACGCTCGGCTTCGGTGAAGGCGGATCGGGTCTGTCCGACAAAGAGATCAAGAGTCGGGTGA
CAAGCGAACTGAAGAAGCTCTTCCGTCCTGAATTCCTGAACCGCATTGATGAAACAATCGTGTTCAAGAGCCTGACAAAG
GATGAAATTGGGCAGATCGTGAAGCTTATGGTGGCCGATCTGCGCGAGCGTTTGATTGCTCAGAATATGACGATCAATAT
TACCGATGAAGCATGCCGCTATATTGCCAGCGAAGGAACTGATGTTACCTTTGGGGCTCGTCCGCTGCGTCGCGCAATTC
AGCGTCTACTGGAAGATCCGATCTCCGACCAGGTGCTTGAAGGACGCTGGACAAGTGGATCGGTTATCGATGTCGATTTT
GAAGACGGCAAGCTGGTGTTTAAAGAAGGCACAGGGTCGATCCCGGCGCCACGCAAACGCGATAGCATTGCCCAAGATGC
TGAATTGTTGTTACGCGGATATGACCTGTCCAACACTGGGCGCGCGTTAAGTCGTGATGGCGGCGGGTCGGCTTCGGGCG
GTTTGGCTGCAGGTGGTGCAACTGACTAA

Protein sequence :
MSFDKFTDKARKVLVIAQDEARTLHQPYVGTEHILLALIKEKDGLAAQALDRLNVTYDETVQTIRQVVAIDPDTDVSGHL
GFTSRVKRVLENSLREAMQMGQSYISTEHLLLGIIREGEGVAIDVLARMGVTGDAVRGALNDLVGQSAVFAGRINPDVQS
TPSESALKEYGTDLTKKAFDGKLDPVIGRAGEIERIMQILCRRQKNNPLLIGEPGVGKTAVVEGLAQLIVSNQVPDILRN
RRLFTLDISSLVAGSKYRGEFEERLKKCIREVVNAGDIILFIDELHTLIGAGAAEGSIDAASILKPPLSRGEIQVIGATT
IDEYRKHIEKDSALERRFQPITVGEPNEEQSVRIMQGLRDRYEEHHQVHFSDEALQAAVTLSNRYIQDRFLPDKAIDVLD
EAGARMRIRNMTLPPELRDIDEELREMRMKKEAAIANQDFEEAATLRDQEDQLRDKRAEAQKSWEESSRKDVQNVSAEDI
ADVVSMTTGVPVSDLTEAEADKLLRMESVLHERIIGQDEAVTAVSKAIRRARSGLADPKRPTGSFIFLGPSGVGKTELSK
ALAEFLFNSEDALVSFDMSEYMEKHTVSRLIGSPPGYVGYDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLEILEE
GRLTDGQGRVVDFRNTVIIMTSNVGARDIAQTQTLGFGEGGSGLSDKEIKSRVTSELKKLFRPEFLNRIDETIVFKSLTK
DEIGQIVKLMVADLRERLIAQNMTINITDEACRYIASEGTDVTFGARPLRRAIQRLLEDPISDQVLEGRWTSGSVIDVDF
EDGKLVFKEGTGSIPAPRKRDSIAQDAELLLRGYDLSNTGRALSRDGGGSASGGLAAGGATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_13220 YP_003151682.1 ATPase with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 55
Ccur_13220 YP_003151682.1 ATPase with chaperone activity, ATP-binding subunit VFG0080 Protein 1e-152 51