Gene Information

Name : Ccur_11690 (Ccur_11690)
Accession : YP_003151538.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1328066 - 1328776 bp
Length : 711 bp
Strand : -
Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain

DNA sequence :
ATGAATAATGAAACACGGCGAATTCTTCTCGTCGAAGACGAAAAGGCCATTCGCGACGCAGTTGCTGCGTACCTCGAACG
CGAGAACTACTGGGTAACAGCTGTTGGTGATGGCCAGGAAGCACTAGAAGAGTTCAGTAAGCATCATTTTGACCTGGTTA
TTCTCGATTTGATGCTGCCACGTGTTCCGGGTGAGCGGGTATGCCGCGCTATCCGTGACAACTCCGATGTGCCCATTATT
ATGCTAACAGCCAAGGGTGAGGTTGAAGACCGCATTATTGGCTTAGAGCTGGGTGCTGACGATTATTTGGTTAAGCCGTT
TAGTCCGCGCGAGCTGGTGGCGCGCGTGCGTGCTCTGCTGCGCCGCGTGCATTCCGACGTTGAGCCGCAGCGCGAAGTAC
TTGAATTTGGCGAGCTCACCATTGACGTAAGTGGACATAAGGTGCTTGTTTCTGGTAAAGAAGTTGACCTAACGGCTAGT
GAATTCAAACTTCTGACCACCCTTTCACGGTATCCGGGACGTGTGTATTCCCGTATGGAACTGGTGGAAAAGGTACTCGG
CTACGACTTTGAAGGCTATGAGCGCACAATAGATAGTCATGTGAAGAACCTGCGCGCAAAGATTGGCGACAATCCGCGTA
ATCCCACGTGGCTGCACACAGTTCATGGTGTGGGCTATCGATTTGAGGACCCAACGAAGCAAGGTCAGTAA

Protein sequence :
MNNETRRILLVEDEKAIRDAVAAYLERENYWVTAVGDGQEALEEFSKHHFDLVILDLMLPRVPGERVCRAIRDNSDVPII
MLTAKGEVEDRIIGLELGADDYLVKPFSPRELVARVRALLRRVHSDVEPQREVLEFGELTIDVSGHKVLVSGKEVDLTAS
EFKLLTTLSRYPGRVYSRMELVEKVLGYDFEGYERTIDSHVKNLRAKIGDNPRNPTWLHTVHGVGYRFEDPTKQGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-33 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AE000516.2.gene3505. Protein 2e-39 45
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein BAC0596 Protein 7e-33 45
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein CP001138.1.gene2239. Protein 7e-33 45
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_012469.1.7685629. Protein 6e-35 45
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_011595.7057856.p0 Protein 2e-38 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_010410.6002989.p0 Protein 2e-38 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_010400.5986590.p0 Protein 2e-38 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_005054.2598277.p0 Protein 7e-29 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_014475.1.orf0.gen Protein 7e-29 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein CP000034.1.gene2186. Protein 5e-33 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002695.1.916589.p Protein 4e-33 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein BAC0039 Protein 5e-33 44
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein CP000675.2.gene1535. Protein 9e-39 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_013450.8614421.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_007793.3914279.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_007622.3794472.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002745.1124361.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_009782.5559369.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002951.3237708.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_003923.1003749.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002758.1121668.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_009641.5332272.p0 Protein 2e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein HE999704.1.gene2815. Protein 2e-31 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002952.2859905.p0 Protein 4e-34 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein CP004022.1.gene1676. Protein 8e-32 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AF130997.1.orf0.gene Protein 6e-28 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein EU250284.1.orf4.gene Protein 8e-28 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AM180355.1.gene1830. Protein 3e-28 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AF162694.1.orf4.gene Protein 1e-26 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AF155139.2.orf0.gene Protein 2e-33 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_008702.1.4607594. Protein 1e-35 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein BAC0111 Protein 5e-24 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_007622.3794948.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_003923.1003417.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_013450.8614146.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002951.3238224.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_007793.3914065.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002758.1121390.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_010079.5776364.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein NC_002952.2859858.p0 Protein 7e-30 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein AE016830.1.gene1681. Protein 7e-37 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein CP000647.1.gene2531. Protein 2e-31 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein DQ212986.1.gene4.p01 Protein 3e-29 41
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein HE999704.1.gene1528. Protein 8e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein VFG1389 Protein 2e-25 43
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein VFG1702 Protein 2e-33 42
Ccur_11690 YP_003151538.1 response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein VFG1563 Protein 4e-33 42