Gene Information

Name : Ccur_10800 (Ccur_10800)
Accession : YP_003151453.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1226937 - 1227812 bp
Length : 876 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGACAACAAGCGTTACGGACTGAACAAGCAACTGGCCCAGATGCTCAAAGGCGGCGTCATTATGGACGTAACGACCCC
CGAACAAGCACATATCGCTGAAGAAGCAGGAGCCTGTGCAGTCATGGCACTTGAACGTATTCCTGCTGATATTCGCGCAG
CAGGTGGCGTGTCACGCATGAGTGATCCCAAAATGATCAAGGGGATACAGCAAGCAGTCAGTATCCCGGTGATGGCAAAA
TGCCGCATTGGTCATTTTGTCGAAGCGCAGATTCTTGAAGCTATAGAAATCGACTACATCGACGAATCCGAGGTGCTCTC
CCCTGCTGACGACGTGTATCACATCGACAAGACTGCCTTTTCAGTGCCGTTTGTTTGCGGCGCACGCAACTTAGGCGAAG
CGCTCAGACGTATTGCTGAGGGTGCCACAATGATCCGCACGAAAGGTGAACCGGGCACGGGCGATGTTGTACAGGCCGTT
ACGCACATGCGCCTTATCCAAGCGCAAATTCATCAGGTAGCAAGCCTGCGTGAAGATGAACTCTTCGAAGAAGCAAAACG
CTTACAAGTACCCGTTGATTTACTGCGCACAGTCCACGATAGTGGAGCGCTACCTGTAGTGAATTTTGCGGCTGGTGGCG
TAGCAACTCCAGCAGACGCAGCCCTTATGATGCAGCTGGGCGCTGAAGGTGTATTTGTTGGGTCGGGTATCTTCAAATCG
GGTAACCCCGCCAAACGTGCACAAGCCATTGTAAAGGCTGTTGCCAACTATAAAGATGCCTCTCTGATTGCTTCACTTTC
TGAAGACTTGGGCGAAGCCATGGTGGGCATCAACGAACAGGAAATCGAATTACTTATGGCCGAACGAGGCAAGTAA

Protein sequence :
MDNKRYGLNKQLAQMLKGGVIMDVTTPEQAHIAEEAGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQQAVSIPVMAK
CRIGHFVEAQILEAIEIDYIDESEVLSPADDVYHIDKTAFSVPFVCGARNLGEALRRIAEGATMIRTKGEPGTGDVVQAV
THMRLIQAQIHQVASLREDELFEEAKRLQVPVDLLRTVHDSGALPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPAKRAQAIVKAVANYKDASLIASLSEDLGEAMVGINEQEIELLMAERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-83 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 70