Gene Information

Name : Ccur_10580 (Ccur_10580)
Accession : YP_003151431.1
Strain : Cryptobacterium curtum DSM 15641
Genome accession: NC_013170
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1202522 - 1203298 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGGAAGCATCAGTTAGCGGCCAGCATGTAAGAATCCAGGGCGAGTCCACGCTTACCCCAGTAAACGACCAACAGGTAAA
AACTCAAGATGAGCTCACCCTTATGATCGATATGCGCGGGATCCACAAGACCTACCTGATGGGTGATGAACCAGTGCACG
CGCTCGATGGCATCGACTTTGCTGTTGCAAAGGGTGAATTCGTTTCGGTTATTGGGGCGTCAGGGTCGGGCAAATCGACG
TTAATGAACATTATCGGCTTGCTCGACGTGCCCGACGAAGGAGCATATTATCTTGCCGGGCGCGATGCCGCATCGCTATC
CGATTCGGATGCCGCTCGCATTCGTAACCGGACTATCGGCTTTGTATTTCAGGATTTCAACCTGCTCCCCACGATGAACG
CCTTCGAAAACGTGCGACTACCCCTGCTCTATCGTGGTATTAAACCAAAAGAAGCAGGAGAGCGGGCGCGCGAGGCACTT
ACACGCGTGGGGTTGGGTAACCGGTCGGGTCATCTTCCCGCACAGCTTTCCGGCGGACAACAACAACGCGTTGCTATTGC
GCGCGCATTAGCTGGCAAGCCAGAAGTGCTGCTTGCCGACGAGCCCACGGGCGCACTCGATTCGAAAACAAGCGAAGAAA
TCATGCAGTTGCTTGAAGCTTCCAATAGCGCCGGGCAAACAATCGTGTTCATTACGCATAACCCCGAACTAGCACTGCGC
GCCTCGCGTAGCGTGTCCATTTCTGATGGGCATATACAGGAAAGGACCGCCTCATGA

Protein sequence :
MEASVSGQHVRIQGESTLTPVNDQQVKTQDELTLMIDMRGIHKTYLMGDEPVHALDGIDFAVAKGEFVSVIGASGSGKST
LMNIIGLLDVPDEGAYYLAGRDAASLSDSDAARIRNRTIGFVFQDFNLLPTMNAFENVRLPLLYRGIKPKEAGERAREAL
TRVGLGNRSGHLPAQLSGGQQQRVAIARALAGKPEVLLADEPTGALDSKTSEEIMQLLEASNSAGQTIVFITHNPELALR
ASRSVSISDGHIQERTAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-28 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccur_10580 YP_003151431.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-49 52
Ccur_10580 YP_003151431.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-39 49
Ccur_10580 YP_003151431.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-39 48
Ccur_10580 YP_003151431.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 6e-35 47
Ccur_10580 YP_003151431.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-31 41