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Name : Ksed_05550 (Ksed_05550) Accession : YP_003148387.1 Strain : Kytococcus sedentarius DSM 20547 Genome accession: NC_013169 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 554052 - 556649 bp Length : 2598 bp Strand : + Note : PFAM: C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB DNA sequence : ATGGACCTTCAACCGACCACCCTCGTGTCCGAGGTCCTGGCCATCGCCCAGCGAGAGGCCCAGGCCGCCGGCCACGCCGA GATCACCCCTGCCCACGTCGCCGCGGCCACGGTCGCCTTGGGCGACGCCACCGTGAGCTCCCTCCTGGCCGCCGGAGGGA CCTCGCCGGAGGCGGTTGCCGCGGCCACCCGCTCGACGCTGTCCAGCCTGCCGACGGCAACCGGCCAGACCCCCCAACTG GGCCAGCAGGCGCTGCGACTGCTGCAGCAGGCGCACACCATCATGACCGCGCGGGGCGACACCCACCTGGCCGTCGACGT CCTGACCCTGGCGCTGGTGGAGACCGGCGCGATCACCGCCGACGCGGCGGCCGTGTCCGCCGAGCTCGATGCCCTCCGCG GCGGCACGAAGGTGACCAGCGAGAACCCGCAGAACGGCTCGGAAGCACTGGAGCAGTACGGCACCGACCTCACGGCGCTG GCCCGGGAGGGAGCGCTGGACCCCGTCATCGGGCGGGACTCCGAGATCCGGCGCGTGGTGCAGGTGCTCTCACGTCGCAC GAAGAACAACCCGGTGCTCATCGGCGAGCCGGGCGTGGGCAAGACCGCCGTGGTGGAGGGGCTCGCGCAGCGCATCGTGG ACGCCGACGTGCCCGAGTCGCTCCGGGGCAAGCGCCTCATCAGCCTCGACCTGGGGGCGATGGTGGCCGGGGCCAAGTAC CGCGGCGAGTTCGAGGAGCGCCTCAAGTCCGTGCTCGAGGAGATCAAGGCCTCTGACGGCCAGATCGTCACCTTCATCGA CGAGCTCCACACCGTGGTGGGCGCCGGCGGCACCGGGGACGGCTCCATGGACGCCGGAAACATGCTCAAGCCCATGCTGG CGCGCGGCGAGCTGCGCCTCGTGGGGGCCACCACCTTGGACGAGTTCCGCGAGAACATCGAGAAGGACGCCGCCCTGGAG CGCCGCTTCCAGCAGGTGTTCGTGGGCGAGCCCTCGGTGGTCGACACCATCGCCATCCTGCGTGGTCTGAAGGAGCGCTA CGAGGCGCACCACAAGGTCACGATCGAGGACTCGGCCCTGGTGGCCGCCGCCACCCTGTCCGACAGGTACATCACCCACC GCCAGCTGCCCGACAAGGCGATCGACCTCATCGACGAGGCGGCCAGCCGGTTGCGCATGGAGATCGATTCCTCGCCGATG GAGATCGACACCCTGCGCCGCGCCGTGGACCGTTTGGCGATGGAGGAGATGCACCTGGCCGCCGAGACCGACGAGGCCTC TCGTGAGCGGCTCGCCGCCCTGCGTGAGGACCTCGCGGCCAAGCGCGAGGAGCTCTCGAACCTGAACGCGCGGTGGCAGG CCGAGAAGACCGGCCTGAACCGGGTGGGCGAGCTCAAGGCCCAGCTGGACGAGGCCCGCACCCAGGCCGAGCGGCTGCAG CGCGAGGGCGACTACGCCGGCGCGTCCAAGTTGCTCTACGGGGACGTCCCCGCGCTGGAGGCACAGCTGGCCGAGGCCGA GGGGCGCGATGCGGGGCGCGGCCCCGACGCGGAGGGCGACGCCCCCGCATCGGGGCAGGTCGGTGACGCGACGGCGCCGA TGGTGTCCGATGCTGTGACGGCCGACGACATCGCCGAGGTGATCGCCGCCTGGACCGGCATCTCCGCCGGACGCCTGCTC GAGGGCGAGACCGAGAAACTGCTGCGCATGGAGGAGTTCCTGGGCGAGCGCCTGATCGGGCAGACCGCGGCAGTGCGGGC CGTGTCCGATGCGGTGCGCCGCTCCCGCGCGGGGCTGGCGGACCCGGACCGGCCCACCGGCTCGTTCCTGTTCCTGGGCC CCACGGGCGTCGGTAAGACCGAGCTGGCCAAGGCGCTGGCGGACTTCCTGTTCGACGACGAGCGGGCGATGGTGCGCATC GACATGTCCGAGTACAGCGAGCGGCACGCCGTCGCGCGTCTGGTGGGTGCGCCCCCCGGGTACGTCGGCCACGACGAGGG CGGGCAGCTGACCGAGGCGGTGCGGCGCCGGCCGTACTCGGTGGTGCTGCTGGACGAGGTGGAGAAGGCCCACCCCGAGA CCTTCGACATCTTGTTGCAGGTGCTCGACGACGGGCGGCTGACCGATGGCCAGGGGCGGACGGTGGACTTCCGCAACACC ATCCTCATCATGACCTCGAACCTGGGTTCCCAGTACCTGGTGGACCCGTCGCTGGACCCGGCCGTGCGGACGGAGTCGGT GATGGCCGCGGTGCGGGCCCACTTCAAGCCGGAGTTCCTCAACCGGCTGGACGACACGGTGGTGTTCGAGCCGCTGTCGC GCGAGGAGCTGGCCCGCATCGTGGACCTGCAGGTGGACGCGCTGGCCAGCCGGCTGGCGGCGCGCCGCATCACGCTGCAG GTCACGGACGCGGCCCGCGCCTGGCTGGCGGACCAGGGATACGACCCGGCCTTCGGGGCCCGGCCGCTGCGCCGCCTGGT GCAGACCGAGGTGGGCGACACCTTGGCCCGGGCGCTGCTCGCCGGGGAGGTCCGTGACGGCCAGGAGGTCACCGTGGACG TAGCCGACGATGCCGAGGGTGGCCTGCGCCTGGTCTGA Protein sequence : MDLQPTTLVSEVLAIAQREAQAAGHAEITPAHVAAATVALGDATVSSLLAAGGTSPEAVAAATRSTLSSLPTATGQTPQL GQQALRLLQQAHTIMTARGDTHLAVDVLTLALVETGAITADAAAVSAELDALRGGTKVTSENPQNGSEALEQYGTDLTAL AREGALDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVDADVPESLRGKRLISLDLGAMVAGAKY RGEFEERLKSVLEEIKASDGQIVTFIDELHTVVGAGGTGDGSMDAGNMLKPMLARGELRLVGATTLDEFRENIEKDAALE RRFQQVFVGEPSVVDTIAILRGLKERYEAHHKVTIEDSALVAAATLSDRYITHRQLPDKAIDLIDEAASRLRMEIDSSPM EIDTLRRAVDRLAMEEMHLAAETDEASRERLAALREDLAAKREELSNLNARWQAEKTGLNRVGELKAQLDEARTQAERLQ REGDYAGASKLLYGDVPALEAQLAEAEGRDAGRGPDAEGDAPASGQVGDATAPMVSDAVTADDIAEVIAAWTGISAGRLL EGETEKLLRMEEFLGERLIGQTAAVRAVSDAVRRSRAGLADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRI DMSEYSERHAVARLVGAPPGYVGHDEGGQLTEAVRRRPYSVVLLDEVEKAHPETFDILLQVLDDGRLTDGQGRTVDFRNT ILIMTSNLGSQYLVDPSLDPAVRTESVMAAVRAHFKPEFLNRLDDTVVFEPLSREELARIVDLQVDALASRLAARRITLQ VTDAARAWLADQGYDPAFGARPLRRLVQTEVGDTLARALLAGEVRDGQEVTVDVADDAEGGLRLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ksed_05550 | YP_003148387.1 | ATPase with chaperone activity | VFG2076 | Protein | 5e-106 | 44 |
| Ksed_05550 | YP_003148387.1 | ATPase with chaperone activity | VFG2084 | Protein | 8e-103 | 42 |
