|
Name : Ksed_04060 (Ksed_04060) Accession : YP_003148246.1 Strain : Kytococcus sedentarius DSM 20547 Genome accession: NC_013169 Putative virulence/resistance : Resistance Product : antimicrobial peptide ABC transporter ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 393329 - 394108 bp Length : 780 bp Strand : + Note : PFAM: ABC transporter DNA sequence : ATGAGCCTCGAACTGACTGATGTGACCGTGACCTTCCCCGACGGTGAGGGCGTGCGCCACGTGCTCGACGGGTTGGACCT GTCGGTGGCTGCCGGCGAGGCGGTGGCGCTGACTGGGCCCAGCGGCTCGGGCAAGTCGACCCTGCTGGCCGTGGCCGGGT TGCTGCGCCGCCCCGATGCGGGGAGCGTCCGTCTGGGCGGGCGCGAGTGCGGCGACCTGTCCTCCTCCCGGCGCGATGCG GTGCGGCGCGAGCTGGTGGGGCTGGTGTTCCAGCAGGCCAAGCTGCTGTCGGCCCTCACGGCCCAGGAGCAGCTGGAGCT CGTGGCCCGGCTGCGCGGGGCCCGGGGCGGTGCCCTGCGGCAGGCGCAGGACAAGGCCCGGTCGTTGCTGGCAGAGCTGG GCATGGAGGAGGCGGCCGGCCACCGGCCGCACCAGCTCTCCGGCGGCCAGCAGCAGCGGGTGGCCCTGGCCCGGGCGCTC ATGAGCGACCCGGCGGTGCTACTGGTGGACGAGCCCACCTCCGCGCTGGACCCGGCGCGGGCCGGTGAGGTCTTCGCCCG GTTGGCGCGGATCGCGCGGGAGCACGACGTGGCCATCTTGGTGGTGACCCACGACGAGCGACACCTCGGCCTGATGGATC GGGTGTTGACGATGGACTTGGGACGCGCCGTCCTGGCCGATGCCGTAGGTGAGTGGCGGCGGGAGGAGACGGCGGACTCC CACGAGCCGGTTGCGGCGGGGACGGCCCGACCGCGGGGCGCCTCCCTGTTGACGGTCTGA Protein sequence : MSLELTDVTVTFPDGEGVRHVLDGLDLSVAAGEAVALTGPSGSGKSTLLAVAGLLRRPDAGSVRLGGRECGDLSSSRRDA VRRELVGLVFQQAKLLSALTAQEQLELVARLRGARGGALRQAQDKARSLLAELGMEEAAGHRPHQLSGGQQQRVALARAL MSDPAVLLVDEPTSALDPARAGEVFARLARIAREHDVAILVVTHDERHLGLMDRVLTMDLGRAVLADAVGEWRREETADS HEPVAAGTARPRGASLLTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-26 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-26 | 41 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-26 | 41 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ksed_04060 | YP_003148246.1 | antimicrobial peptide ABC transporter ATPase | NC_008702.1.4606598. | Protein | 1e-25 | 45 |
