Gene Information

Name : Ksed_26860 (Ksed_26860)
Accession : YP_003150401.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 2766144 - 2767457 bp
Length : 1314 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGCGCGTTGCAGTGATCGGTACCGGTTACCTGGGGGCGGTGCACGCCGCCGGGATGGCCCAGTTGGGCTTCCAGACGGT
GGGCGTGGACGTGGACCAGGCCAAGGTGGATCGGCTGCAGGCCGGGACCAGCCCGTTCTACGAGCCGGACTTCGAGCCGA
TCCTGGCTGAGCAGGTGGCTTCGGGCAGGTTGCGGTTCACGACCGACTTCTCGCAGATCTCGGATGCGGACGTGGTGTTC
ATCGGGGTGGGGACGCCGCAGAAGGCCGACTCGCACGCGGCGGACCTGACGTACATCGACGCGGCGATCGCCTCGATCAC
CCCGCACCTGAAGGACGGTGCGCTGGTGGCGGGTAAGTCGACGGTGCCGGTGGGCACGGCGCAGCGGTTGGCCGAGTACA
TCGCCGAGCACACCGCCGATGGGGTGACGGCCGAGCTGGCGTGGAACCCGGAGTTCCTGCGTGAGGGCTTCGCCGTGCAG
GACACGCTGCACCCCGACCGGTTGGTGTTCGGTGTGACCAGTGACCGGGCGGAGTCGATCCTGCGGGAGGTGTACGCCCG
CACCATCGAGCAGGACGGCACGCCGGTGGTGGTCACCGACCTGCCGACCGCCGAGCTGGTGAAGGTGGCGGCGAACAGCT
TCTTGGCCACGAAGATCTCGTTCATCAACGCGATGGCCGAGATCTGTGAGTTCGCCGGGGCGGACGTGACGAAGCTGGCT
GACGCGATCGGGCACGACGACCGCATCGGTCGCAAGTTCCTCAATGCCGGGGTCGGTTTCGGCGGCGGCTGCCTGCCCAA
GGACATCCGCGCCTTCTCCGCCCGCGCCGGGGAGCTCGGTGCCGGCCACGCGCTGGAGTTCCTCGCCGAGATCGACAAGA
TCAACTCGCGCCGACGCGATCACGTGGTGGAGCTGGCCAAGCAGGAGCTGGGTGGTGACCTGCGGGATCGCAAGGTGGCC
GTGCTGGGTGCGAGCTTCAAGCCGAACTCCGACGACGTGCGTGACTCCCCGGCGTTGGCGGTGGCCGGGGCGTTGCACCT
GGCCGGTGCGGACGTGCGCGTGTACGACCCCAAGGGCATGGAGAACGCCGCGAAGGTGTACCCGCCGCTGACCTATGCGG
ACTCCGCCGAGGCGGCGATCGCCGACGCCGAGCTGGTGGTACACCTGACCGAGTGGCAGGAGTTCAAGGACCTAGACCCC
GCGGTGTTGGTCGAGACCGTGGGCACGCCGACCATCATCGACGGGCGCAACGCGCTGGACCCGGTGGCCTGGCGGGCCGC
GGGGTGGACCTACATCGGTCTGGGTCGCCCCTGA

Protein sequence :
MRVAVIGTGYLGAVHAAGMAQLGFQTVGVDVDQAKVDRLQAGTSPFYEPDFEPILAEQVASGRLRFTTDFSQISDADVVF
IGVGTPQKADSHAADLTYIDAAIASITPHLKDGALVAGKSTVPVGTAQRLAEYIAEHTADGVTAELAWNPEFLREGFAVQ
DTLHPDRLVFGVTSDRAESILREVYARTIEQDGTPVVVTDLPTAELVKVAANSFLATKISFINAMAEICEFAGADVTKLA
DAIGHDDRIGRKFLNAGVGFGGGCLPKDIRAFSARAGELGAGHALEFLAEIDKINSRRRDHVVELAKQELGGDLRDRKVA
VLGASFKPNSDDVRDSPALAVAGALHLAGADVRVYDPKGMENAAKVYPPLTYADSAEAAIADAELVVHLTEWQEFKDLDP
AVLVETVGTPTIIDGRNALDPVAWRAAGWTYIGLGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-78 50
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-78 50
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-78 50