Gene Information

Name : Ksed_26290 (Ksed_26290)
Accession : YP_003150345.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2696470 - 2698170 bp
Length : 1701 bp
Strand : -
Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK

DNA sequence :
GTGAGTGACATGGCCGCCGACACCCCCGCACCGCCTGCCGCAGGCCCCCGCCTGGTGGCGCGCGACCTGTCCGTCGGCAC
CCGCCACCGCACCCTGGTCTCCGGGGTGGACCTCACCCTCGATGCGGGCGAGCGCGTCGGTCTGATCGGTGAGTCCGGGT
CGGGCAAGTCGCTCACGGCCCTGGCGATCATGGGGCTGCTGCCGGACAACCTGCACGCCACCGGCAGCATCGAGCTCACG
CCCGAGGGGGGCGCCACCACGCAGGTGGTCGGCGCCAGCGACCGTGCGATGTCGCGCATCCGTGGCCTGGACCTCTCGAT
GGTCTTCCAGGAGCCCATGAGCGCGCTCAATCCCACGATGCGCGTCGGCGACCAGGTGGCCGAGGTGATGGAGATCCACG
GCACCGCCCGCGGGGACGCCGCCGCCCGCCGAGCCGTGGAGCTGCTCGAGAGCGTGGGCATCACCGATGCCGAGGGCGTC
GCCCGCGCCCACCCGCACCAGCTCTCCGGCGGGCAGCGGCAGCGGGTGGTCATCGCCATCGCGCTGGCCAACGACCCCGA
CGTGCTGATCTGCGACGAGCCGACCACCGCCCTGGACGTGACCGTGCAGGCCACCGTGCTGCGCCAGGTGCTCGACGGCG
CCCGCGAGCACGACGCGGCGCTGTTGTTCATCACCCACGACCTCGCCGTGGTCTCGCAGGTGTGTGAGCGCGTGGTGGTG
CTCAAGGACGGGCAGGTGGTGGAGCGCGGGACGGTGGCCGAGGTCTTCGGCGCCCCCCAGCACCCGTACACGCAGGCCCT
GGTGGCGGCCTCGCGCCTGAAGCCCCGCGCGGGCACCGGTACCACGGCGCTCGACCTCGCCGGCTCGCCCGGCATCGATG
CGGTGGCCGAGCCCGGCGAGAGCACCCCGCCGGAGGCTCCCGCCGTCGCGGTGGAGGACGTGCGGCAGGTCTACACCCGC
CCCCGCCGGAGCCTGTTCTCCGCCCGGCCGCAGGTCGTGGCGCTCGATGGGGTGAGCCTCACCGTCGAGCCCGGCGAACG
CTTCGGCATCGTCGGGGAGTCGGGGTCGGGCAAGTCGACGCTGCTGCGGCTGGTCGCGGGGTTGGAGTCCCCCGTATCGG
GGCGGGTCGAGGTGCTCGGGCGGCAGGTCTCGGGCGTGCCGGAGCGCCGGCTCGGGTGGCTGCGGGAGGGCGTGCAGATG
GTCTTCCAGGACCCGCGCGACTCGCTGGACCCGCGGATGACCGTGCGCGACGTGGTGGCCGAGCCGCTCGTGGCGCAGGG
GTGGTCCGGGGGCGACCGGGACGACCGCGTGGCCGAGCTGCTGCGCCGGGTGGGTCTGGAGCCGTCGATGATGCGGCGCC
ACCCGCACCAGTTCAGCGGCGGGCAGCGGCAGCGCATCAGCATCGCACGGGCCCTGGCGCCCTCGCCGCGGGTGCTGCTG
GCCGACGAGCCGGTCTCCGCCCTGGATGTGAGCGTGCGCGGCCAGGTGCTGGACCTCATCGGGGAGCTGGTGGACGAGCT
GGGGCTGACGCTGGTCTTCGTGAGCCACGACCTCTCGGTGGTCCGGCACGTGTGTGAGCGGGTGGCCGTGATGCGGCGGG
GTGAGCTGGTGGAGGTGGCGCCCACCGAGCAGCTGTGGTCCGCGCCGGGGACGGACTACACCCGCTCCCTCATCGAGGCG
ATCCCGCGCATGGCGGTCTGA

Protein sequence :
MSDMAADTPAPPAAGPRLVARDLSVGTRHRTLVSGVDLTLDAGERVGLIGESGSGKSLTALAIMGLLPDNLHATGSIELT
PEGGATTQVVGASDRAMSRIRGLDLSMVFQEPMSALNPTMRVGDQVAEVMEIHGTARGDAAARRAVELLESVGITDAEGV
ARAHPHQLSGGQRQRVVIAIALANDPDVLICDEPTTALDVTVQATVLRQVLDGAREHDAALLFITHDLAVVSQVCERVVV
LKDGQVVERGTVAEVFGAPQHPYTQALVAASRLKPRAGTGTTALDLAGSPGIDAVAEPGESTPPEAPAVAVEDVRQVYTR
PRRSLFSARPQVVALDGVSLTVEPGERFGIVGESGSGKSTLLRLVAGLESPVSGRVEVLGRQVSGVPERRLGWLREGVQM
VFQDPRDSLDPRMTVRDVVAEPLVAQGWSGGDRDDRVAELLRRVGLEPSMMRRHPHQFSGGQRQRISIARALAPSPRVLL
ADEPVSALDVSVRGQVLDLIGELVDELGLTLVFVSHDLSVVRHVCERVAVMRRGELVEVAPTEQLWSAPGTDYTRSLIEA
IPRMAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-104 47
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-104 47
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-104 47
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-104 47