Gene Information

Name : Ksed_25740 (Ksed_25740)
Accession : YP_003150300.1
Strain : Kytococcus sedentarius DSM 20547
Genome accession: NC_013169
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2643456 - 2644259 bp
Length : 804 bp
Strand : +
Note : PFAM: IstB-like ATP binding protein

DNA sequence :
ATGAGCCGCAAGCCGACCTCCGCCGGCACCGAGTCGCTGAAGCAGATCACCCACCTGGCCGCGGCGTTGAAGGCGCCGCG
GATCACCGAGTCCGCCGCCCGCCTGGCCGACCACGCCCGCGACACCGGATGGACCCACGAGGACTACCTGGCCGCGGTCC
TGGAACGTGAGGTCGCCGCCCGCAACGCCTCCGGCGCCCGGTTGCGCACCCGCGCCGCCGGTTTCGGTGCGGTCAAGACT
CTGGACGACTTCGAATTCGACCACCAACCCGGCGCCCGCACCCCGATCCAGGCCCTGGCCTCGGGTGCGTACCTGGCCGA
GCACCGCAACGTCGTCCTGCTCGGGCCGCCGGGCACCGGTAAGACGCACCTGGCCACCGCCCTGGGCGTCGCCGCCGCCC
GGCAGGGACACCGGGTCCTGTTCGCCACCGCCACCGACTGGGTCACCCGACTGACTGAGGCCCACGACCGCGGCCGCCTG
GCCGCCGAGCTCACCCGGCTACGCCGCTACAGCCTGATCATCGTCGACGAGGTCGGCTACCTACCGTTCGAGCAGTACGC
CGCCAACCTCTTCTTCCAGCTCGTCTCCTCCCGCTACGAGCACGCCTCCCTCATCCTGACGTCCAACCTGCCGTTCAGCT
CCTGGGCCGGCGTCTTCGGCAACCAGGTCGTCGCAGCCGCGATGATCGACCGCATCGTCCACCACGCCGACGTCATCGCC
CTCAAAGGCGCCTCCTACCGGCTCCGCGACCGCGGCGTCGAGACCCTGCCCAGCATCAAGGCCGAGCAGGAATCCCTAGA
CTGA

Protein sequence :
MSRKPTSAGTESLKQITHLAAALKAPRITESAARLADHARDTGWTHEDYLAAVLEREVAARNASGARLRTRAAGFGAVKT
LDDFEFDHQPGARTPIQALASGAYLAEHRNVVLLGPPGTGKTHLATALGVAAARQGHRVLFATATDWVTRLTEAHDRGRL
AAELTRLRRYSLIIVDEVGYLPFEQYAANLFFQLVSSRYEHASLILTSNLPFSSWAGVFGNQVVAAAMIDRIVHHADVIA
LKGASYRLRDRGVETLPSIKAEQESLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-47 43
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 9e-47 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 8e-47 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 8e-47 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 8e-47 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 8e-47 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-46 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 8e-47 42
unnamed CAA21402.1 - Not tested HPI Protein 1e-46 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 8e-47 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-46 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ksed_25740 YP_003150300.1 DNA replication protein VFG1663 Protein 2e-47 43
Ksed_25740 YP_003150300.1 DNA replication protein VFG1627 Protein 5e-47 42
Ksed_25740 YP_003150300.1 DNA replication protein VFG1606 Protein 5e-47 42
Ksed_25740 YP_003150300.1 DNA replication protein VFG1515 Protein 5e-47 42